Dipodomys spectabilis (banner-tailed kangaroo rat): 122118080
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Entry
122118080 CDS
T07891
Name
(RefSeq) protocadherin beta-14-like isoform X1
KO
K16494
protocadherin beta
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
dsp04515
]
122118080
Cell adhesion molecules [BR:
dsp04515
]
Cadherins
Protocadherins
122118080
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
122118080
NCBI-ProteinID:
XP_042547867
LinkDB
All DBs
Position
Unknown
AA seq
800 aa
AA seq
DB search
MGIREALALQKRQVLIFFVLLRLSHASTESVHYIMPEETETGSFVANLLKDLGLGVEELS
FREARVVSDDNKRHLRLDLLTGDLLLNEKLDREELCGSAEPCILHFQVVLENPLQFFQVE
LHVRDVNDNSPTFLDKEIILRISESAPIGTTFLMESAQDVDIGRNSLQNYTISPNSHFHI
KIRNSVDGKIYPELVLDRALDHEKESEHRLTLTALDGGSPPRSGATLVLIKVLDINDNAP
KFAQSLYEVQVPEDTPIGSWIITMSAKDLDAGNHGKISYTFFHASEDIRKTFDMNALSGE
VHLKSALDFEVIQSYSITIQATDGGGLSEECTLGIKVLDVNDNPPEIMISSTTKTIKENA
SETLVALFSVRDLDSGDNGRMVCSVEEDIPFILKPTVKNFYMLITERALDREERDEYNIT
ITASDMGTPRLQTQHTITLQVSDVNDNAPEFTQSSYTLWVRENNSPALHIGTISATDRDS
GSNAQLTYSLLPGPQPGPDAAAALVSINADSGQLFALRALDYEALQAFEVRVRAADRGSP
PLSSQALVRVQVLDANDNSPFVLYPLQNASAPCTELLPRAAEPGYLVSKVVAVDRDSGQN
AWLSFQLLKATEPGLFSVWPHNGEVRTARLLSERDAPKHRLLLLVKDNGEPPRSASVTLH
VLLVDGFSQPYLPLPDAAAPERAQPDRLTAYLVIALAAVSSLFLLSLLLFVAFRLCRRSR
ARSLAGCALPDGPLPGHLLDVSGTGTLAHSYQYEVCLQGGTGTNEFKFLKPIIPNLEIQG
TSTNMNGMENFRNSFGFNIQ
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atggggatcagagaagcactggctcttcagaaaaggcaagtgctgattttctttgttttg
ctacgattgtctcatgctagtactgaatctgtgcactatattatgccagaggaaactgaa
acgggttcatttgtggctaatcttctgaaggacttggggctaggggtggaggagctgtcc
ttccgggaagctagggtggtgtctgatgacaataaaaggcatttgcgccttgatttgctg
acgggagatttgcttctaaatgagaaactggacagagaagagctgtgtggctctgcagaa
ccctgcatactgcatttccaggtagtattggaaaaccctttacagttttttcaggttgaa
ctgcatgtcagagatgtaaatgataactctcccacattcttagacaaggaaataattttg
agaatatcagaaagtgctcccattggaaccacctttctaatggaaagtgctcaagatgtg
gacataggaaggaacagtcttcagaattacacaattagccccaattcccatttccacatt
aaaattagaaacagtgttgatgggaagatttacccagagctggttctggatagagcatta
gatcatgagaaggaatctgagcacagattaacactcacagcactggatggtggatctcca
cccaggtctggggcaactttggttctcattaaggttttggacatcaatgataatgcacct
aagtttgctcagagtctctatgaggtgcaggtcccagaggatacacccattgggtcctgg
ataatcaccatgtctgctaaggatctggatgcaggaaaccatgggaaaatatcctacacg
tttttccatgcatctgaagatattcgcaaaacgtttgacatgaacgcattatctggggaa
gttcacttgaaatcagcgctggattttgaagtgatacagtcctatagtataactattcag
gcaacagatggtggaggtctttcagaagaatgcactcttggaattaaagtattagatgtc
aatgacaatccaccagagataatgatttcatcaactacaaagacaatcaaagagaatgct
tcagagaccctggtcgctctatttagtgttcgagatcttgattctggagataatggaaga
atggtttgttctgttgaagaagatataccttttatcctgaaaccgaccgtcaagaacttt
tacatgttgataacagagagagcactagacagagaggaaagagatgaatacaacataaca
atcactgcttcagatatgggaacccccaggctgcaaacccagcacaccatcaccctgcag
gtgtccgacgtgaacgacaacgcccccgaattcacgcagtcctcctacaccctgtgggtc
cgcgagaacaacagccccgccctgcacattggcaccatcagcgccacagacagagactcg
ggcagcaacgcccagctgacctactcgctgctgcccggcccgcagcccggccccgacgcg
gcggcggcgctggtgtccatcaacgcggacagcgggcagctgttcgccctgagggcgctg
gactatgaggccctgcaggcgttcgaggtgcgcgtgcgcgccgccgaccgcggctcgccc
ccgctcagcagccaggcgctggtgcgcgtgcaggtgctggacgccaacgacaactcgccc
ttcgtgctgtacccgctgcagaacgcgtctgcgccctgcaccgagctgctgcccagggcg
gccgagccgggctacctggtgagcaaggtggtggcggtggaccgcgactcgggccagaac
gcctggctgtcgttccagctgctcaaggccacggagcccgggctgttcagcgtgtggccg
cacaatggcgaggtgcgcaccgccaggctgctgagcgagcgcgacgcgcccaagcacagg
ctgctgctgctggtcaaggacaatggcgagccgccgcgctcggccagcgtcacgctgcac
gtgctgctggtggatggcttctcgcagccctacctgccgctgcccgacgcggcggcgccc
gagcgcgcgcagcccgaccgcctcactgcctacttggtcatcgcgctggcggccgtgtct
tctctcttcctcttgtctctgctgctcttcgtggccttcaggctgtgcaggaggagcagg
gcgcgctcgctggccggctgcgcgctgcccgatggccccttgcctggacacctgctggac
gtgagtggcacggggaccctggcccacagctaccagtatgaggtgtgtctgcagggaggg
actggcaccaatgagttcaaattcctgaagcccattatccctaatcttgaaatccagggc
actagtaccaatatgaatggaatggagaattttcggaatagctttggattcaacattcaa
taa
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