Dipodomys spectabilis (banner-tailed kangaroo rat): 122118084
Help
Entry
122118084 CDS
T07891
Name
(RefSeq) protocadherin beta-16-like
KO
K16494
protocadherin beta
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
dsp04515
]
122118084
Cell adhesion molecules [BR:
dsp04515
]
Cadherins
Protocadherins
122118084
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
VWA_3_C
InlK_D3
Motif
Other DBs
NCBI-GeneID:
122118084
NCBI-ProteinID:
XP_042547871
LinkDB
All DBs
Position
Unknown
AA seq
799 aa
AA seq
DB search
MEIGWIPNQRQRQVLIFFVLLSMSGADTELGPYFVVEEMEKGSFVANLGKDLGLELPQLS
TRRARVISQGNKEHFQLKVQTGDLLINEKIDREELCGTTEPCILYFQVLMEMPLEIFQAE
LRVKDINDNSPVFTEKEMVFKIPENSPLGNTFLLNNALDLDVGNNSVQKYNISPNSHFHV
LTRNRSDGRKYPELVLEKELDREQEPEVRLTLTALDGGSPPRSGTSQVRIEIVDINDNAP
EFQHPIYKVQVPENSTVGSLVVTVSARDIDSGAYGQIVYTLAHSSEETNKILEVNPMTGE
IRLKKQVDFETVMYYEVDIEATDGGGLSGKCTLVLQVVDINDNPPEVTMSAITNPVPENS
PDTVVAVFSVSDSDSGTNGKMVSSIPEDLPFLLKSSGKNFYTLVTERALDREERDEYNIT
ITVSDLGTPRLQTQHTITLQVSDVNDNAPEFTQSSYTLWVRENNSPALHIGTISATDRDS
GSNAQLTYSLLPGPQPGPDAAAALVSINADSGQLFALRALDYEALQAFEVRVRAADRGSP
PLSSQALVRVQVLDANDNSPFVLYPLQNASAPCTELLPRAAEPGYLVSKVVAVDRDSGQN
AWLSFQLLKATEPGLFSVWPHNGEVRTARLLSERDAPKHRLLLLVKDNGEPPRSASVTLH
VLLVDGFSQPYLPLPDAAAPERAQPDRLTAYLVIALAAVSSLFLLSLLLFVAFRLCRRSR
ARSLAGCALPDGPLPGHLLDVSGTGTLAHSYQYEVCLQGGAGTNEFKFLKPIIPNLQPQG
SGKEIEEKSPFRNSLGFSY
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atggagattggatggataccaaatcagagacaaaggcaagtcttaattttctttgtttta
ttgagcatgtctggggcggacacagagctggggccctatttcgtggtggaagaaatggag
aaaggctccttcgtagccaatctaggaaaagacctggggctggaattgccacagttgtcc
acccgccgggccagagtaatttcccagggaaataaagagcatttccagctcaaggtacag
actggagatttgctcataaatgagaaaatagatcgcgaggagctatgcggtaccacggag
ccttgcatactatatttccaagtgttgatggaaatgcctttagagatatttcaggctgaa
ctgagagtgaaagacataaatgataattctcccgtgttcactgaaaaagaaatggttttt
aaaataccagaaaacagcccactgggaaatacattccttcttaataatgctctggacttg
gacgtaggaaacaatagtgttcagaagtataacatcagccccaactctcacttccatgtt
ctaacccgtaatcgcagcgatggtaggaaatacccagagctggtgctggaaaaagagcta
gatcgggaacaggagcctgaagtaagactaaccttgacagcgttggatggcggctcccca
ccgcggtctgggacctcacaggtccgcattgaaatagtagacatcaatgacaatgcgcct
gaatttcagcatcctatctacaaggtgcaggttcctgagaatagcacagtaggctctttg
gtggtcacagtctcggccagggacatagacagtggagcctatgggcaaatagtgtacaca
ctcgcccactcttctgaagaaactaacaaaattttagaggttaatcctatgacaggagaa
attcggctgaagaaacaagtagattttgaaacagtaatgtattatgaagtggacatagag
gccacagatggaggtggtctttcaggaaaatgcacccttgtcctacaggttgtggacata
aatgataacccaccagaagtgaccatgtcagcaattacaaacccggtcccagaaaactcc
ccagatacggtagttgcggttttcagtgtttcagattctgactcaggaaccaatgggaag
atggtttcttccattccagaagatcttccctttcttctaaaatcttcagggaagaacttc
tacaccttggtaacagaaagagcactagacagagaagaaagagatgaatacaacatcacc
atcactgtctctgacttggggactcccaggctgcaaacccagcacaccatcaccctgcag
gtgtccgacgtgaacgacaacgcccccgaattcacgcagtcctcctacaccctgtgggtc
cgcgagaacaacagccccgccctgcacattggcaccatcagcgccacagacagagactcg
ggcagcaacgcccagctgacctactcgctgctgcccggcccgcagcccggccccgacgcg
gcggcggcgctggtgtccatcaacgcggacagcgggcagctgttcgccctgagggcgctg
gactatgaggccctgcaggcgttcgaggtgcgcgtgcgcgccgccgaccgcggctcgccc
ccgctcagcagccaggcgctggtgcgcgtgcaggtgctggacgccaacgacaactcgccc
ttcgtgctgtacccgctgcagaacgcgtctgcgccctgcaccgagctgctgcccagggcg
gccgagccgggctacctggtgagcaaggtggtggcggtggaccgcgactcgggccagaac
gcctggctgtcgttccagctgctcaaggccacggagcccgggctgttcagcgtgtggccg
cacaatggcgaggtgcgcaccgccaggctgctgagcgagcgcgacgcgcccaagcacagg
ctgctgctgctggtcaaggacaatggcgagccgccgcgctcggccagcgtcacgctgcac
gtgctgctggtggatggcttctcgcagccctacctgccgctgcccgacgcggcggcgccc
gagcgcgcgcagcccgaccgcctcactgcctacttggtcatcgcgctggcggccgtgtct
tctctcttcctcttgtctctgctgctcttcgtggccttcaggctgtgcaggaggagcagg
gcgcgctcgctggccggctgcgcgctgcccgatggtcccttgcctggacacctgctggac
gtgagtggcacggggaccctggcccacagctaccagtatgaggtgtgtctgcagggaggt
gctggcaccaatgagttcaaattcctgaagcctatcatccccaatctccagccccagggc
tctgggaaagagatagaggaaaagtctcccttccgaaacagtttaggttttagttactga
DBGET
integrated database retrieval system
