Dipodomys spectabilis (banner-tailed kangaroo rat): 122118120
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Entry
122118120 CDS
T07891
Name
(RefSeq) protocadherin beta-14-like
KO
K16494
protocadherin beta
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
dsp04515
]
122118120
Cell adhesion molecules [BR:
dsp04515
]
Cadherins
Protocadherins
122118120
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
122118120
NCBI-ProteinID:
XP_042547965
LinkDB
All DBs
Position
Unknown
AA seq
799 aa
AA seq
DB search
MEMPVFPAQQKRQVTTIIFLLLLWEVGSETIKYSVLEERDRGSFVGNLAEDLGLGVEELV
TRGAQILSRGNKQHLQLEQKSGELLLKERVDREELCGDTDPCILHFQLLLKNPVQFIQGE
LQIQDVNDHAPEFLENEILLKIVESTHPGTLFPLKIAQDLDVGCNTVQNYSISTNSHFHL
LTRNHSDGRKYPELVLDKALDREEEPELRLVLTALDGGSPPRTGTSQVLIVVLDINDNAP
EFVQGLYGVQVPENTPVGSLVITVSARDLDAGIHGELSYSFFQSSNQVIQAFEINTDTGE
IRLKKLLDFEEIKFYRMEIEASDGGGLSGKCTVEIEVLDVNDNAPQLTMSLFNSDIPENA
PETVVAIFGISDPDSGDNGKMKCSIQNSLPFLLKPTVENFYTLVTEGSLDRENRAEYNIT
ITVSDLGTPRLQTQHTFTLQVSDVNDNAPEFTQSSYTLWVRENNSPALHIGTISATDRDS
GSNAQLTYSLLPGPQPGPDAAAALVSINADSGQLFALRALDYEALQAFEVRVRAADRGSP
PLSSQALVRVQVLDANDNSPFVLYPLQNASAPCTELLPRAAEPGYLVSKVVAVDRDSGQN
AWLSFQLLKATEPGLFSVWPHNGEVRTARLLSERDAPKHRLLLLVKDNGEPPRSASVTLH
VLLVDGFSQPYLPLPDAAAPERAQPDRLTAYLVIALAAVSSLFLLSLLLFVAVRLCRRSR
ARSLAGCALPDGPLPGHLLDMSGTGTLAHSYQYEVCLQGGAGTNEFKFLKPIIPNLQSHG
SGKEVEENSPFRNSLGLNY
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atggagatgccggtcttcccagcacagcagaaaaggcaagtgaccaccattattttctta
ctactcttgtgggaggtgggcagtgaaactattaaatattccgttctagaagaaagagac
agaggctcttttgtaggcaacctagcagaagatttggggctaggtgtagaggagctggtc
actcggggtgcacagattctttccagagggaacaaacagcatttgcagctggaacagaag
agtggggaattactcctcaaagaaagagtggaccgggaagagttgtgtggggacacagat
ccatgcattttgcatttccagttgctactgaaaaacccggtgcagtttattcaaggtgag
ctacagatccaagatgtaaatgaccatgctccagaattcttagaaaatgaaattctcctt
aaaatcgtggaaagcacacatccagggaccctgtttcctttgaaaatagctcaagatttg
gacgtaggctgcaatacagttcagaactattcaattagcaccaactcccatttccatctt
ctcactcgtaatcacagcgatggcaggaaataccctgaactggtgctggacaaagcactg
gaccgggaagaggagcctgagctcagattagtcctcacagcactagatggtgggtcacca
cccaggactgggacttctcaggttctcattgtagttctggatatcaatgacaatgcccct
gaatttgttcagggactctacggggtacaggtaccagagaacactcccgtaggttccctt
gtcatcactgtatcagctagagatttagatgctgggattcacggagaactttcctactca
tttttccaatcctcaaatcaagtcattcaggcctttgaaataaacacagacacaggagaa
attagattaaaaaaactgttggattttgaggaaattaagttttaccgcatggaaattgag
gcctcagacggcgggggactttcaggaaaatgcactgtagaaatagaagtgctggatgta
aatgacaatgcccctcagttgacgatgtcactatttaacagtgacattccagaaaacgct
ccggaaactgtggtcgctatttttggaatttcagatccagactctggagacaatgggaaa
atgaagtgttccatccagaacagtctcccttttcttctgaaacctacagtagaaaatttc
tacacattggtcacagaaggctctctggacagagaaaacagagcagaatacaatatcacc
attaccgtctccgacttggggactcccaggctgcaaacccagcacaccttcaccctgcag
gtgtccgacgtgaacgacaacgcccccgaattcacgcagtcctcctacaccctgtgggtc
cgcgagaacaacagccccgccctgcacattggcaccatcagcgccacagacagagactcg
ggcagcaacgcccagctgacctactcgctgctgcccggcccgcagcccggccccgacgcg
gcggcggcgctggtgtccatcaacgcggacagcgggcagctgttcgccctgagggcgctg
gactatgaggccctgcaggcgttcgaggtgcgcgtgcgcgccgccgaccgcggctcgccc
ccgctcagcagccaggcgctggtgcgcgtgcaggtgctggacgccaacgacaactcgccc
ttcgtgctgtacccgctgcagaacgcgtctgcgccctgcaccgagctgctgcccagggcg
gccgagccgggctacctggtgagcaaggtggtggcggtggaccgcgactcgggccagaac
gcctggctgtcgttccagctgctcaaggccacggagcccgggctgttcagcgtgtggccg
cacaatggcgaggtgcgcaccgccaggctgctgagcgagcgcgacgcgcccaagcacagg
ctgctgctgctggtcaaggacaatggcgagccgccgcgctcggccagcgtcacgctgcac
gtgctgctggtggatggcttctcgcagccctacctgccgctgcccgacgcggcggcgccc
gagcgcgcgcagcccgaccgcctcactgcctacttggtcatcgcgctggcggccgtgtct
tctctcttcctcttgtctctgctgctcttcgtggccgtcaggctgtgcaggaggagcagg
gcgcgctcgctggccggctgcgcgctgcccgatggccccttgcctggacacctgctggac
atgagtggcacggggaccctggcccacagctaccagtatgaggtgtgtctgcagggaggt
gctggcaccaatgagttcaaattcctgaagcctatcatccccaatctccagtcccatggc
tctgggaaggaggtagaggaaaattctcccttccgaaacagtttaggtttaaattactga
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