Dipodomys spectabilis (banner-tailed kangaroo rat): 122118122
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Entry
122118122 CDS
T07891
Name
(RefSeq) protocadherin beta-5-like
KO
K16494
protocadherin beta
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
dsp04515
]
122118122
Cell adhesion molecules [BR:
dsp04515
]
Cadherins
Protocadherins
122118122
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
122118122
NCBI-ProteinID:
XP_042547966
LinkDB
All DBs
Position
Unknown
AA seq
790 aa
AA seq
DB search
METALAKTPEKRQVAFLALLLFVWGSGCETIRYSIPEETESGHFVANLAKDLGLRVGELA
TRSARIHYKGNKQLLQLDVKTGSLLLYEKLDREVLCGATEPCLMHFQLLLGNPVQIFQAD
LHLTDINDHSPEFLEREMLLKIPESAQPGTVFPLKAAQDLDIGSNTVQNYTISPNLNFHV
VTHHRGDGRKYPELVLDKALDREEQAELSLTLTALDGGAPPSSGTSTVRIEVVDINDNAP
EFSQSLYEVQVPENSPMDSLVVTVSARDLDAGTHGSVVYALFQVDGVSQPFVIDETTGEI
HLRRLLDFEATPYYNMEISATDGGGLSGKCTVAIQVLDVNDNAPELTISSFMNTIPENSP
ETVVSVFSVFDSDSGDNGKMMCSIPNDLPFLLKSTFENFYTLLTERPLDRESTAEYNITI
TVSDLGTPRLQTQHTITLQVSDVNDNVPEFTQSSYTLWVRENNSPALHIGTISATDRDSG
SNAQLTYSLLPGPQPGPDAAAALVSINADSGQLFALRALDYEALQALEVRVRAADRGSPP
LSSQALVRVQVLDANDNSPFVLYPLQNASAPCTELLPRAAEPGYLVSKVVAVDRDSGQNA
WLSFQLLKATEPGLFSVWPHNGEVRTARLLSERDAPKHRLLLLVKDNGEPPRSASVTLHV
LLVDGFSQPYLPLPDAAAPERAQPDRLTAYLVIALAAVSSLFLLSLLLFVAFRLCRRSRA
RSLAGCALPDDPLPGHLLDVSGTGTLAHSYQYEVCLQGGAGTNEFKFLKPILPNILPQYS
GEETGNHPLF
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atggagactgcgctagcaaaaacgccagagaaaaggcaagttgcttttcttgctttgcta
ttgtttgtgtgggggtctggttgtgagacaattcgatattccattccagaagaaacggaa
agtggccactttgtggccaacttggcaaaagatctggggctgagggtgggggagttggcc
actcgcagcgcgcgaatccattacaaaggaaacaaacagctcttgcagctagatgtaaag
acaggcagtttgctcctgtatgaaaagctggacagggaggtgctgtgcggggcgacagaa
ccctgtctaatgcatttccagctcctacttggaaacccagtgcagatttttcaagctgat
ttgcacctcacagatataaacgaccattctccagagttcctagagagagagatgctccta
aagatcccagagagcgcccagccagggacagtgttccctctgaaagcagctcaggacctc
gacatagggagcaacactgtccagaattacacaatcagccccaaccttaattttcatgtg
gttacccatcaccgcggagatggcaggaaatatccagagctggtgctggataaagcgctg
gacagggaggagcaggctgagctcagcctcactctgactgcgctggatggtggggctcca
cccagctctgggacctccacagtgcgcatagaagtcgtggacatcaatgataacgcccct
gaattttcacagtcgctgtatgaggtgcaggttcctgagaacagcccgatggattcttta
gttgttactgtctctgctcgagatttagatgcaggaacgcatggtagtgtggtctatgct
ctatttcaagtagacggcgtttcccagccgtttgtaatagatgaaaccacaggagaaata
catctgagaaggttgttggattttgaagcaactccatattacaatatggagatttcagcc
accgatggcggagggctttcaggaaaatgcactgtggctatacaggtgttggatgtgaat
gacaatgccccagaactgaccatctcgtcgttcatgaacaccattcccgaaaactcacca
gagactgtagtttctgtttttagtgtatttgattcagattctggggataatgggaaaatg
atgtgttccattccaaacgatctcccgttcttgttaaagtccacattcgagaacttttac
accctactgactgagaggccattggacagagaaagcacagccgaatacaacatcaccatc
actgtctccgacttagggactcccaggctgcaaacccagcacaccatcaccctgcaggtg
tccgacgtgaacgacaacgtccccgaattcacgcagtcctcctacaccctgtgggtccgc
gagaacaacagccccgccctgcacattggcaccatcagcgccacagacagagactcgggc
agcaacgcccagctgacctactcgctgctgcccggcccgcagcccggccccgacgcggcg
gcggcgctggtgtccatcaacgcggacagcgggcagctgttcgccctgagggcgctggac
tatgaggccctgcaggcgctcgaggtgcgcgtgcgcgccgccgaccgcggctcgcccccg
ctcagcagccaggcgctggtgcgcgtgcaggtgctggacgccaacgacaactcgcccttc
gtgctgtacccgctgcagaacgcgtctgcaccctgcaccgagctgctgcccagggcggcc
gagccgggctacctggtgagcaaggtggtggcggtggaccgcgactcgggccagaacgcc
tggctgtcgttccagctgctcaaggccacggagcccgggctgttcagcgtgtggccgcac
aatggcgaggtgcgcaccgccaggctgctgagcgagcgcgacgcgcccaagcacaggctg
ctgctgctggtcaaggacaatggcgagccgccgcgctcggccagcgtcacgctgcacgtg
ctgctggtggatggcttctcgcagccctacctgccgctgcccgacgcggcggcgcccgag
cgcgcgcagcccgaccgcctcactgcctacttggtcatcgcgctggcggccgtgtcttct
ctcttcctcttgtctctgctgctcttcgtggccttcaggctgtgcaggaggagcagggcg
cgctcgctggccggctgcgcgctgcccgatgaccccttgcctggacacctgctggacgtg
agtggcacggggaccctggcccacagctaccagtatgaggtgtgtctgcagggaggtgct
ggcaccaatgagttcaaattcctgaaaccgatattacccaatattttgcctcagtattct
ggtgaagagacaggaaaccatcctctcttctga
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