Dipodomys spectabilis (banner-tailed kangaroo rat): 122118151
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Entry
122118151 CDS
T07891
Name
(RefSeq) protocadherin beta-5-like
KO
K16494
protocadherin beta
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
dsp04515
]
122118151
Cell adhesion molecules [BR:
dsp04515
]
Cadherins
Protocadherins
122118151
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
122118151
NCBI-ProteinID:
XP_042548003
LinkDB
All DBs
Position
Unknown
AA seq
780 aa
AA seq
DB search
METALAKTPEKRQVAFLALLLFVWGSGCETIRYSIPEETESGHFVANLAKDLGLRVGELA
TRSARIHYKGNKQLLQLDVKTGSLLLYEKLDREVLCGATEPCLMHFQLLLGNPVQIFQAD
LHITDINDHSPEFLEREMLLKIPESAQPGTVFPLKAAQDLDIGSNTVQNYTISPNLNFHV
VTHHRGDGRKYPELVLDKALDREEQAELSLTLTAVDGGAPPSSGTSTVRIEVVDINDNAP
EFLQSLYKVQVPENSPTDSLVVTVSARDLDAGMYGSVVYALFQEDEVSQPFVIDKMTGEI
RLKKMLDFEEVPHYDLEVIATDTGGFSGKCSVAIEVLDMNDNAPQLTMSTVRSSIPENSP
ETVVAVFSVFDSDSGDNGKMICTIQNDLPFLLKHTFENFYTLATERPLDRERRDQYNITI
TVSDLGTPRLQTQHTFTLQVSDVNDNAPEFTQSSYTLWVRENNSPALHIGTISATDRDSG
SNAQLTYSLLPGPQPGPDAAAALVSINADSGQLFALRALDYEALQAFEVRVRAADRGSPP
LSSQALVRVQVLDANDNSPFVLYPLQNASAPCTELLPRAAEPGYLVSKVVAVDRDSGQNA
WLSFQLLKATEPGLFSVWPHNGEVRTARLLSERDAPKHRLLLLVKDNGEPPRSASVTLHV
LLVDGFSQPYLPLPDAAAPERAQPDRLTAYLVIALAAVSSLFLLSLLLFVAVRLCRRSRA
RSLAGCALPDGPLPGHLLDVSGTGTLAHSYQYEVCLQGGVGTNEFNFLKPVIPNSLFHDT
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atggagactgcgctagcaaaaacgccagagaaaaggcaagttgcttttcttgctttgcta
ttgtttgtgtgggggtctggttgtgagacaattcgatattccattccagaagaaacggaa
agtggccactttgtggccaacttggcaaaagatctggggctgagggtgggggagttggcc
actcgcagcgcgcgaatccattacaaaggaaacaaacagctcttgcagctagatgtaaag
acaggcagtttgctcctgtatgaaaagctggacagggaggtgctgtgcggggcgacagaa
ccctgtctaatgcatttccagctcctacttggaaacccagtgcagatttttcaagctgat
ttgcacatcacagatataaatgaccattctccagagttcctagagagagaaatgctccta
aagatcccagagagcgcccagccagggacagtgttccctctgaaagcagcgcaggacctc
gacatagggagcaacactgtccagaattacacaatcagccccaaccttaattttcatgtg
gttacccatcatcgcggagatggcaggaaatatccagagctggtgctggataaagcgctg
gacagggaggagcaggctgagctcagcctcactctgactgctgtggatggtggggctcca
cccagctctgggacctccacagtgcgcatagaagttgtggacatcaatgataacgcccct
gaatttttacagtcgctctataaggtgcaggttcctgagaacagcccgacagattcttta
gttgtcacggtctctgctcgagatttagatgcaggaatgtatggtagtgtggtctatgct
ctattccaagaagatgaagtttctcaaccatttgtgatagacaaaatgacaggagaaata
cgcctgaaaaagatgttggatttcgaggaagttccacattatgaccttgaggttatagcc
acagatactgggggcttttcaggaaaatgttctgtggccatagaggttttggatatgaat
gacaatgccccacaactgaccatgtcaacggtcaggagctccataccagaaaactcacca
gagactgtagttgctgttttcagtgtatttgattcagattctggggataatgggaagatg
atttgtactattcaaaatgatctcccattcctcctgaaacacacatttgagaacttttac
accctagcaacagagaggcctctggacagagaaagaagagaccaatacaacatcaccatc
accgtctccgacttggggactcccaggctgcaaacccagcacaccttcaccctgcaggtg
tccgacgtgaacgacaacgcccccgaattcacgcagtcctcctacaccctgtgggtccgc
gagaacaacagccccgccctgcacattggcaccatcagcgccacagacagagactcgggc
agcaacgcccagctgacctactcgctgctgcccggcccgcagcccggccccgacgcggcg
gcggcgctggtgtccatcaacgcggacagcgggcagctgttcgccctgagggcgctggac
tatgaggccctgcaggcgttcgaggtgcgcgtgcgcgccgccgaccgcggctcgcccccg
ctcagcagccaggcgctggtgcgcgtgcaggtgctggacgccaacgacaactcgcccttc
gtgctgtacccgctgcagaacgcgtctgcgccctgcaccgagctgctgcccagggcggcc
gagccgggctacctggtgagcaaggtggtggcggtggaccgcgactcgggccagaacgcc
tggctgtcgttccagctgctcaaggccacggagcccgggctgttcagcgtgtggccgcac
aatggcgaggtgcgcaccgccaggctgctgagcgagcgcgacgcgcccaagcacaggctg
ctgctgctggtcaaggacaatggcgagccgccgcgctcggccagcgtcacgctgcacgtg
ctgctggtggatggcttctcgcagccctacctgccgctgcccgacgcggcggcgcccgag
cgcgcgcagcccgaccgcctcactgcctacttggtcatcgcgctggcggccgtgtcttct
ctcttcctcttgtctctgctgctcttcgtggccgtcaggctgtgcaggaggagcagggcg
cgctcgctggccggctgcgcgctgcccgatggccccttgcctggacacctgctggacgtg
agtggcacggggaccctggcccacagctaccagtatgaggtgtgtctgcagggaggtgtt
ggcaccaacgagttcaatttcctgaaacccgttattccgaatagtctttttcatgacact
taa
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