Dipodomys spectabilis (banner-tailed kangaroo rat): 122118251
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Entry
122118251 CDS
T07891
Symbol
Ddx52
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dsp03009
]
122118251 (Ddx52)
Enzymes [BR:
dsp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122118251 (Ddx52)
Ribosome biogenesis [BR:
dsp03009
]
Eukaryotic type
90S particles
Helicases
122118251 (Ddx52)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
AAA_19
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
122118251
NCBI-ProteinID:
XP_042548160
LinkDB
All DBs
Position
Unknown
AA seq
594 aa
AA seq
DB search
MDAHDLFRRLGAGARFDVKRFSADAARFQVGKRKFDLDSSEVLLDFFGNKKPIPGDCGAS
QTHQELQNEEKKKENLIERKREPSKKKRKKISEITSGEDDTTIQWTSSVEAKIEDKKVKG
ENKLTSGKLEHLRQEKVNFFRNKHKIHVQGTDLPDPITTFQQLDQEYKISSRLLQNILDS
GFQMPTPIQMQAIPVMLHGRELLASAPTGSGKTLAFSIPILMQLKQPTNKGFRALIISPT
RELASQIHRELIKISEGTGFRIHMIHKTAEAAKKFGPKSSKKFDILVTTPNRLIYLLKQD
PPGIDLTSVEWLVVDESDKLFEDGKTGFRDQLAFIFLACTSHKIRRAMFSATFAYDVEQW
CKLNLDNVITVSIGARNSAVETVEQELLFVGSETGKLLAMRELVKKGFNPPVLVFVQSIE
RAKELFHELIYEGINVDVIHAERTQQQRDNTVHSFRAGKIWVLICTALLARGIDFKGVNL
VINYDFPASSVEYIHRIGRTGRAGHKGKAVTFFTEDDKPLLRSVANVIQQAGCPVPEYIK
GFQKLLSKQKKKLIKKPLERESISTTPKYFLEQAKWKKGSGQKSKKKATLENKS
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atggatgcccacgatcttttccgccgtctgggcgccggggccagattcgacgtgaaacgc
ttctcggcagacgccgctcgattccaggtgggaaaaaggaaatttgatttggattcttca
gaggtgcttctggacttctttgggaacaagaagcctatcccaggtgactgtggagcatca
caaacacaccaggagcttcaaaatgaagagaaaaaaaaagaaaatctaattgaaaggaaa
agggagcccagtaagaaaaagagaaagaagatttcagaaattacttctggagaggatgac
actactatacagtggacatcatctgtggaagcaaagattgaagataaaaaagttaaagga
gaaaataaactaacttcaggaaagttggaacatctccgacaggaaaaggtgaacttcttc
cggaataaacacaaaattcatgtccagggaactgatcttcctgacccaattactacgttt
cagcagcttgaccaagaatataaaatcagttctcggttacttcagaacattctagactca
ggcttccaaatgcccacaccaatacaaatgcaagctattccagtcatgctgcatggtcgg
gaacttttggcttctgctcctacaggatctgggaagactttggcatttagtattcctatt
ttaatgcagctgaaacaacctacaaataaaggcttcagagccctgattatatccccaaca
agagaacttgccagccagattcaccgagagttaattaaaatctctgagggaacaggattc
aggatacacatgatccacaagacagcagaggcagccaagaaatttggacccaaatcatct
aagaaatttgatattcttgtgactactccaaatcggttaatctatttactaaaacaagat
ccaccaggaatagacctaacaagtgttgagtggctagtcgtggatgaatcagacaaactg
tttgaagatggtaaaactggatttagagaccagttggctttcattttcctggcctgcaca
tctcacaaaattagaagagctatgttcagtgcaacttttgcctatgatgttgaacagtgg
tgcaagctcaacctggacaatgtcattactgtatccattggagcaagaaattctgcagta
gagactgtagaacaagagcttctttttgttggttctgagactggaaaacttctggccatg
agagaacttgtgaaaaagggtttcaatccacctgttctagtttttgttcagtccattgaa
agggctaaagaactttttcatgagctcatatatgaaggcattaatgtggatgttattcat
gcagaaagaacacagcaacagagagataacacagtccatagcttcagagcaggaaaaatc
tgggttctaatttgtacagccttgcttgcaagagggattgattttaaaggtgtgaacttg
gtgatcaattatgacttcccagccagctcagtggagtatatccacaggataggtcgaact
ggaagagcaggacataagggaaaagctgttacatttttcacagaagatgataaaccattg
ttaagaagtgttgccaatgtaatccaacaagcaggatgcccagtacctgaatacataaaa
ggtttccagaaactactaagcaaacaaaagaaaaaattgattaagaaaccattggaaaga
gaaagtattagtacaactccaaaatatttcttagagcaagctaaatggaaaaagggctct
ggccagaaaagtaagaagaaggcaacccttgaaaacaaaagttaa
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