Dipodomys spectabilis (banner-tailed kangaroo rat): 122118687
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Entry
122118687 CDS
T07891
Symbol
Slc6a4
Name
(RefSeq) sodium-dependent serotonin transporter
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp04082
Neuroactive ligand signaling
dsp04721
Synaptic vesicle cycle
dsp04726
Serotonergic synapse
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
122118687 (Slc6a4)
09150 Organismal Systems
09156 Nervous system
04726 Serotonergic synapse
122118687 (Slc6a4)
04721 Synaptic vesicle cycle
122118687 (Slc6a4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dsp02000
]
122118687 (Slc6a4)
Transporters [BR:
dsp02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
122118687 (Slc6a4)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
SNF
5HT_transport_N
Motif
Other DBs
NCBI-GeneID:
122118687
NCBI-ProteinID:
XP_042548506
LinkDB
All DBs
Position
Unknown
AA seq
630 aa
AA seq
DB search
METTPLNSQKVLSACKDGEDCQENGVLQKGIPTPGNQAESSQISNGYSAVPNPSAGDDTR
HSIPAATTTLVAEVHQGERETWGKKMDFLLSVIGYAVDLGNIWRFPYICYQNGGGAFLLP
YTIMAIFGGIPLFYMELALGQYHRNGCISIWRKICPIFKGIGYAICIIAFYIASYYNTIM
AWALYYLISSFTDQLPWTSCKNSWNTGNCTNYFSEDNITWTLHSTSPAEEFYTRHVLQIH
RSKGLQDLGGISWQLALCIMLIFTIIYFSIWKGVKTSGKVVWVTATFPYIILSVLLVRGA
TLPGAWRGVVFYLKPNWQKLLETGVWVDAAAQIFFSLGPGFGVLLAFASYNKFNNNCYQD
ALVTSMVNCMTSFVSGFVIFTVLGYMAEMRNEDVSEVAKDAGPSLLFITYAEAIANMPAA
TFFAIIFFLMLITLGLDSTFAGLEGVITAVLDEFPHIWAKRREWFVLIVVITCFFGSLMT
LTFGGAYVVKLLEEYATGPAVLTVALIEAVAVSWFYGITQFCNDVKEMLGFSPGWFWRIC
WVAISPLFLLFIICSFLMSPPQLRLFQYNYPHWSVILGYCIGTSSVICVPIYITYRLITT
PGTVKERIIKSITPETPTEIPCGDIRLNAV
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atggagaccacacccttgaattctcagaaggtgctgtcagcttgcaaggatggagaggat
tgtcaggaaaacggtgttctacagaaaggtatccctaccccagggaaccaagcagagtcc
agccaaatatctaatgggtattcagcagttcccaaccccagtgcaggtgatgacactcgg
cactcgatcccagctgccaccaccaccctagtggccgaggttcatcaaggagaaagggag
acctggggcaagaagatggatttcctcctctctgtcatcggctatgctgtggacctaggc
aacatctggcgctttccttacatatgttaccagaatggagggggggcattcctcctcccc
tataccatcatggcgattttcggggggatcccactgttttacatggagcttgcactgggc
cagtaccaccgaaatggatgcatttctatatggaggaaaatctgcccaattttcaaagga
attggctatgccatctgcatcattgccttctacattgcctcctactacaataccatcatg
gcctgggcactctactacctcatctcctccttcacggaccagctaccctggaccagctgc
aagaactcctggaacactggcaactgcaccaactacttctcggaggacaacatcacctgg
acactccattccacatcccccgccgaagaattttacacacgccatgtcctgcagatccac
cgctctaagggactccaggacctagggggcatcagctggcagctggccctctgcatcatg
ctcatcttcactattatctacttcagcatctggaaaggtgtcaaaacatctggcaaggtg
gtgtgggtgacagccaccttcccttacatcattctttctgtccttctggtgaggggtgcc
acccttcctggagcctggaggggtgttgtcttctacttgaaacccaattggcagaaactc
ctagagacaggggtatgggtggatgctgctgctcagatcttcttctctcttgggccaggc
tttggggtcctcctagcttttgccagttacaacaagttcaacaacaactgttatcaagat
gccctggtgaccagtatggtaaactgcatgaccagttttgtttcgggatttgtcatcttc
acggtgctcggatatatggctgagatgaggaatgaagatgtatctgaggtggccaaagat
gcaggtcccagcctcctcttcatcacatatgcagaggccatagccaacatgccagcagct
acattctttgccatcatcttcttcctcatgttaatcacactgggcttggacagcacgttt
gcaggcttggagggggtgatcacagctgtgctggatgagtttccacacatctgggccaag
cgccgggagtggtttgtgctcattgtggtcataacgtgtttctttggatctttaatgacc
ttaacttttggaggggcctacgtggtgaagctgctggaggagtatgccacagggcctgcg
gtactcactgtcgcgcttatagaagcagtcgctgtgtcctggttctatggcatcactcag
ttctgcaatgacgtgaaagaaatgcttggtttcagccctggatggttctggaggatctgt
tgggtagccatcagccctctgtttctactgttcatcatttgcagttttttgatgagccca
cctcagctacgacttttccaatataattatcctcactggagtgtcatcctgggttactgc
ataggaacctcatctgtcatctgtgtccccatatacataacataccggctaatcaccact
ccagggacagttaaggagcgcattattaaaagtattactccagaaacaccaacagaaatt
ccctgtggggacatccgattgaatgctgtgtaa
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