Dipodomys spectabilis (banner-tailed kangaroo rat): 122118716
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Entry
122118716 CDS
T07891
Symbol
Mlh3
Name
(RefSeq) DNA mismatch repair protein Mlh3 isoform X1
KO
K08739
DNA mismatch repair protein MLH3
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
122118716 (Mlh3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dsp03400
]
122118716 (Mlh3)
DNA repair and recombination proteins [BR:
dsp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
122118716 (Mlh3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
DUF2271
Motif
Other DBs
NCBI-GeneID:
122118716
NCBI-ProteinID:
XP_042548562
LinkDB
All DBs
Position
Unknown
AA seq
1452 aa
AA seq
DB search
MIKCLSAEVQAKLRSGLAISSLGQCVEELVLNSIDAEAKCVAIRVNMETFQVQVIDNGFG
MGDDDVDKVGNRYFTSKCSSIQDLENPRFYGFRGEALASIANMASAMEISSKKNRTMKTF
VKLFQNGKALKVCEADLTRPSTGTTVTVYNLFYQLPVRRKCMDPRLEFETVRQRIEALSL
MHPSISFSLRNDVSGSMVLQLPKTKNICSRFCQIYGLSKSQKLKEIQFKYKEFELSGYIS
CEAHYNKNMQFLFVNRRLVLKTKLHKLIDFLLRKESIICKPKNGPANRQMSLSPGHRSAP
ELYGIYVINVQCQFCEYDVCMEPAKTLIEFQNWDTPLTCIQEGVIMFLKQEKLFVELSGE
DIKEFSEDNDFSLFGATLQKHMSSHEKSEQGSFQEACNNILDSYEVFNLQSKAVKRKFTV
ENITTENSTESEATRKKRNDSFSYNFESDGPCHSKMTESSLYNKDSSHLESRILEQETVE
APESRENEKHQKPYLEHNTLENPCGSSPQTFSVPFQTHRSEEIRADGEIQKVCTTVNGTA
ANILNNRIQNQLEKFEDATETDCQSLPFGSTLFRVHNAEREKERKREPHSYGRKQVFTYG
RVKLCSTGFITHVVQNEQCKSTEAEHSFKNYDQPGSRAQETFGNRTHHSFEIPDCKDVTS
TFSKESAQLPNKSFCRTHSSYRLENKATAANKNFSLFQKSGEKLHPDCLLPGTSSSFEWY
RHVAGISKKTDKLTGSTRPIGHKKLSLSSQLGSLEKFKREYGKIKIPLDIEVEENGEVRT
CLSLQDEPNSSLKDRNHIDQASVCKITTLKHSDSNDDCQPVSHILCSEKFPLSKEDFLEQ
QMPCLGESPITITEFSHCNRKLLDAEKSPQSLASKLSRLKDSEKETQTMEEMNYLNEFSI
SDSSRKSSDLHSGLTLDFYELFKNEHEKTESSILPVLEPVTQDHSFNNDGETHSNSDIAE
NTVTPAALLALPCNSYKIAREDVDVLIRASEQHTGSLESPSLMVTSQVEDAKKTQNEISS
QSEESKSGSYGENESTTSLDWQQYFDVALGRMVYINKMTGLSTFVAPTEDIQTACTQDLT
TVAVDVLFGNGSQYRCHPFRSDLILPFLPRPREERTVLKQNIRDAVGDAVGSGSLKSLFS
EWDNPIFARYPEVAVDVSSGQAESLAVKIHNILYPYRFTKEMIHSMQVLQQVDNKFIACL
MSTKTEENGREGGNLLILVDQHAAHERIRLEQLITDSYEKQQPQGSCRKKLLSSIIIPPL
EVMVTEEQRRILWCYHKNLEDLGLEFIFPDTSDSLVLVGKVPLCFVEREANELRRGRSTV
TKSIVEAFIREQVELLQTTGGIQGTLPLTVQKVLASQACHGAIKFNDALSLEESFRLIEA
LSSCQLPFQCAHGRPSMLPLADLDHLEQEKQVKPNLAKLRRLAQAWHRFGKAGGCDDTRQ
SPQQSVPLCEPP
NT seq
4359 nt
NT seq
+upstream
nt +downstream
nt
atgatcaagtgcttatcagctgaagtgcaagccaaattgcggtctggtttggccataagt
tccttaggccaatgtgttgaggaacttgtcctcaatagtattgatgctgaagcaaaatgt
gtggccatcagagtgaatatggaaaccttccaagttcaggtgatagacaatggatttgga
atgggggatgatgatgtagacaaggtgggaaatcgttatttcacaagtaaatgcagctcg
atacaggacttagagaacccaaggttttatggtttccgaggggaggccttggcaagtata
gctaacatggccagtgctatggaaatttcatccaagaaaaacaggacaatgaaaactttt
gtgaaactgtttcagaatggaaaagccctgaaagtttgtgaggcagatttgactagacca
agcacaggaacaacagtaacagtatataatctgttttaccaactacctgtgaggaggaaa
tgcatggatcctagactggagtttgagactgttagacaaaggatagaagctctttcactg
atgcacccttccatttctttctctttgaggaatgatgtttctggttccatggttcttcaa
ctccctaaaaccaaaaacatatgttcccgattttgtcaaatttatggattgagcaagtcc
caaaagctaaaagaaatacaatttaaatataaggaatttgagcttagtggctatatcagc
tgtgaagcacactacaataagaatatgcagtttttgtttgtgaacagaagactagttttg
aagacaaagttgcataaactcattgactttttattacgaaaagaaagtattatatgcaag
ccaaagaatggccctgctaataggcaaatgagtttaagtcctgggcatcggtctgctcca
gaactctatgggatatatgtgatcaatgtgcagtgccaattctgtgagtatgatgtgtgc
atggagccagcaaaaactctaattgagtttcagaactgggatactcccttgacttgtatt
caggaaggagtaataatgtttttaaagcaagaaaaattatttgtggaattatcaggtgaa
gatattaaggaatttagcgaagataatgattttagtttatttggtgctactctccagaag
cacatgtcctctcatgagaagagtgaacaaggcagtttccaggaagcatgtaataatatt
ttggattcctatgaagtgtttaatttacaatcaaaagctgtgaaaaggaaatttactgta
gaaaacataaccacagagaattctacagaatcagaagctaccagaaaaaagagaaatgac
tcattttcctataattttgaatcagatggcccatgccatagcaaaatgacagagtcatct
ttatacaacaaagacagctctcacttagaatcaaggatattggaacaagaaacagttgaa
gcaccagaatctagagaaaatgagaaacatcaaaaaccttacttggaacataatacttta
gaaaacccatgtggaagcagtccacaaacattttcagtcccttttcagacccatcgttct
gaggagattcgggcagatggagaaatacagaaagtatgtactactgttaatggcacagct
gccaacatcttgaataatagaattcaaaatcagctagagaaatttgaagatgctactgaa
acagactgccaatctctgccttttgggtcaacattatttagagtacataatgctgagaga
gagaaagagagaaaaagagagcctcatagttatggaagaaaacaagttttcacttatgga
cgagttaagttatgttccactggctttataactcatgtagtacagaatgaacaatgtaaa
tcaactgaagcagaacattcatttaaaaattatgatcaacctggctctcgtgcccaagaa
acatttggaaacagaacacatcattcatttgagattccagactgcaaggatgtaaccagc
actttcagtaaagaatctgctcaactgcccaacaaaagtttttgcagaacacattccagc
tatagactagagaacaaagcaacagcagctaataaaaatttttctctttttcagaaaagt
ggtgaaaaattacacccagattgcttattacctggtacatcctcctcttttgagtggtat
agacatgttgcaggcattagtaagaaaactgataagttgactggttctaccagacccata
ggccataagaaactaagtttgagttcacaactaggatctttggagaaatttaaaagggaa
tatgggaagataaaaattcctttggatatagaagtagaggaaaatggtgaagtcaggacc
tgtctcagtcttcaagatgaacctaatagttcattgaaagacaggaaccacatagaccaa
gctagtgtttgtaaaattactactctaaagcatagtgattcaaatgatgactgtcaacca
gtaagtcacatcctgtgctcagagaagtttccactttctaaagaagatttcttggaacaa
cagatgccttgtttgggagaaagtcctataactataacagagttctctcactgcaacaga
aagcttttggatgctgagaagtcacctcaatcactagcctctaaattatccagactgaag
gattctgaaaaagagactcaaacaatggaggagatgaattatttaaatgaattttcaatt
tcagattccagtaggaaaagcagtgacttgcacagtgggctaacccttgatttttatgag
ctatttaaaaatgagcatgagaaaacagaaagcagtatcctcccagtgttagaacctgtc
acacaagatcattcctttaataatgatggtgaaacacattctaacagtgatatagcagag
aacactgtgacaccagcagctctgttggcattaccctgtaacagttataaaattgccaga
gaagatgttgatgttcttatcagagcttcggagcaacacacaggaagtcttgagtctccc
agtctaatggtaacaagtcaagtagaagatgccaaaaaaacccaaaatgaaatatcttcc
cagagtgaggaatctaagtcaggatcttatggggaaaatgagtcaaccacttctttggat
tggcagcaatattttgatgtagccctgggcagaatggtatacatcaacaaaatgactggc
cttagcacatttgttgctcctactgaggacattcaaactgcttgtactcaagacctgaca
actgtggctgtagatgtcctatttgggaatgggtctcaatacagatgtcatccttttaga
agcgaccttattcttcctttccttccaagacctcgggaagagaggactgtgttgaaacag
aatatcagagatgctgtgggtgatgctgttggtagtggatcactaaagtctttattttca
gaatgggacaatccaatatttgccagatacccagaggttgctgttgatgtaagcagtggc
caggctgagagcttagcagttaaaattcataacatcttgtatccctaccgtttcaccaaa
gaaatgattcattcaatgcaggttctccagcaagtggataacaagtttattgcctgttta
atgagcactaagactgaagagaacggcagagaaggtggaaacctgctaatcctggtggat
cagcatgctgcccatgagcgcattcgtttagagcagctcattactgactcatatgagaag
caacaaccacaaggttcttgtcggaaaaaattactatcttctattataattcctcctcta
gaggtaatggtaacagaagaacagaggagaatcttatggtgttaccacaaaaatctggaa
gatctgggccttgaatttatttttccagacaccagtgattctctggtccttgtgggaaaa
gtaccactctgttttgtagaaagagaagccaatgaacttcgaagagggagatctactgtc
accaagagtattgtggaggcgtttattcgagagcaagtagagctgctgcagaccacagga
ggcatccagggaactctgccactgactgttcagaaggtgctggcctcccaagcctgccat
ggagccattaagtttaatgatgccctgagtctagaggagagctttcgccttattgaagct
ttgtcctcatgtcagctgccattccagtgtgctcatgggagaccttccatgctgccgtta
gctgacctggaccacttggagcaggaaaaacaggtaaaacctaatcttgctaagcttcga
agactggcccaggcatggcaccgttttgggaaagcaggaggctgtgatgacacaagacag
agcccgcagcaatctgtgcctctttgtgagccaccgtga
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