Dipodomys spectabilis (banner-tailed kangaroo rat): 122118969
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Entry
122118969 CDS
T07891
Symbol
Trim16
Name
(RefSeq) tripartite motif-containing protein 16
KO
K12006
tripartite motif-containing protein 16 [EC:
2.3.2.27
]
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dsp04121
]
122118969 (Trim16)
Enzymes [BR:
dsp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122118969 (Trim16)
Ubiquitin system [BR:
dsp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
122118969 (Trim16)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRY
SPRY
zf-B_box
ANCHR-like_BBOX
Motif
Other DBs
NCBI-GeneID:
122118969
NCBI-ProteinID:
XP_042548878
LinkDB
All DBs
Position
Unknown
AA seq
557 aa
AA seq
DB search
MAELDLMASGPLPTITTYPMDPVSSDSGSASSIEEDVGYLGRPVEKTEGQNNDEAQPGAS
NGEGEEEILCDFCLGASRVRAVKSCLTCMVNYCEEHLRPHQENSKLHSHQLTEPAKDQDL
RTCPAHHNPLVAFCCTDQQCICQECGQYEHKSHTSVSLEAARRNKEADLRCTQINLEQKL
KLNENAIARLQANHKSVLVSVSEVKVVAEEQFGELLAAVRKAQADVMLFLEEKEHAALNQ
ANSIKTHLEYRSAEMEKSKQELARLAAISNTVLFLEEYSKFKNAEDTAFPSVYIGLKDKL
SGIRKVITDSTTDIIQLLENYKEKLQEFAKEEEYDIRTQVSAIVQRKYRTSKPEPRTREQ
FLEYACDITFDPDTAHRYLRLQEDNRKVTNTSPWEHPYPDHPSRFVYWRQVLSQQSLYLH
RYYFEVEISGAGTYVGLTCKGIDRKGEERNGCISGNNFSWSLYWNGKEFTAWHSDTETPL
KAGPFRRLGIYVDFPGGILSFYGIEYDAMTLVHKFDCKFSEPVYAAFWLSKKENAIRIVD
LGEEPEKPASSAVEAAP
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggcagagttggatctgatggcttcagggccactgcccaccatcaccacttaccctatg
gatcctgtcagttcagattctgggtcagccagctccatagaagaggatgtgggctaccta
gggaggccagtagagaagactgagggacagaacaatgacgaggcacagccgggagcttcc
aatggtgaaggggaggaggagatcctgtgtgacttctgtctgggcgccagcagagtgagg
gcagtgaagtcctgtctaacttgcatggtgaattactgtgaggaacatctgcggccgcac
caagagaacagcaaactgcacagccaccagctgactgaaccagcaaaggaccaagacctg
cgtacctgccctgcccaccacaacccattggttgccttctgctgcactgaccagcagtgt
atctgtcaggaatgtggccagtatgagcacaagagccacacttcagtctccttggaggct
gcccgcaggaacaaggaagctgaccttcggtgtacccagataaacttggagcagaaactc
aagttgaatgaaaatgccatcgccaggctccaagccaaccataagtccgttttggtgtct
gtatcagaggtcaaagtggttgctgaagagcagtttggagaactccttgctgccgtgagg
aaagctcaggccgatgtcatgctcttcttggaggagaaggagcatgctgccctgaaccag
gctaacagcattaaaacccatctggagtacaggagtgcagaaatggagaaaagcaagcag
gagctggccaggttggcagccatcagcaatactgttctcttcctggaggaatactccaag
tttaagaatgctgaagatactgctttccctagtgtttacattgggctaaaggataagctc
tcaggtatccgcaaagtcatcacagactccacaacagacataatccagttgctggagaac
tataaggaaaagctacaggagtttgccaaggaagaagagtatgacatcagaactcaagtg
tctgccattgttcagcgcaaatatcggacctcaaaacctgaacctagaaccagagaacag
tttctcgaatatgcatgtgacatcacatttgaccctgacacagcacacaggtatctccgg
ctacaggaggacaaccggaaggtcaccaacacctcaccttgggaacatccttacccagac
caccccagcaggtttgtgtattggcggcaggtgctgtctcaacaaagtctgtacctacac
aggtactattttgaggtggagatctctggggcaggcacctacgttggcctgacctgcaaa
ggcattgaccggaaaggggaagaacgcaacggttgcatttctggaaacaacttctcctgg
agcctctattggaatgggaaggagttcacagcctggcacagtgacacagagaccccgctc
aaagccggccctttccggaggctcggaatctacgttgacttcccaggagggatcctttcc
ttctatggcatagagtatgatgctatgactctggttcacaagtttgactgcaagttttca
gagccagtctatgctgccttctggctttccaaaaaagaaaatgctatccggattgtggat
ctgggagaagaacctgaaaagccagcaagctctgcagtggaggctgctccctag
DBGET
integrated database retrieval system
