Dipodomys spectabilis (banner-tailed kangaroo rat): 122119561
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Entry
122119561 CDS
T07891
Symbol
Hnrnpm
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein M isoform X1
KO
K12887
heterogeneous nuclear ribonucleoprotein M
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122119561 (Hnrnpm)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dsp03041
]
122119561 (Hnrnpm)
Spliceosome [BR:
dsp03041
]
Common components
Common spliceosomal components
hnRNP proteins
122119561 (Hnrnpm)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
HnRNP_M_NLS
RRM_MARF1
RRM_3
RRM_occluded
Collagen_mid
RBD_DEAH11
RRM_5
PhageMin_Tail
Motif
Other DBs
NCBI-GeneID:
122119561
NCBI-ProteinID:
XP_042549491
LinkDB
All DBs
Position
Unknown
AA seq
763 aa
AA seq
DB search
MAAGVEAAAEVTATEPKMEEESGAPGVPSGNGAPGPKGEGERPTQNEKRKEKNIKRGGSR
FEPYANPTKRYRAFITNIPFDVKWQSLKDLVKEKVGEVTYVELLMDAEGKSRGCAVVEFK
MEESMKKAAEVLNKHSLSGRPLKVKEDPDGEHARRAMQKVMATTGGMGMGPGGPGMINIP
PSILNNPNIPNEIIHALQAGRLGSTVFVANLDYKVGWKKLKEVFSMAGVVVRADILEDKD
GKSRGIGTVTFEQSIEAVQAISMFNGQLLFDRPMHVKMDERALPKGDFFPPERPQQLPHG
LGGIGMGLGPGGQPIDANHLNKGIGMGNIGPAGMGMEGIGFGINKMGGMEGPFGGGMENM
GRFGSGMNMGRINEMERGMGAGFERDFARNEMGMARSFGEPLGRGMEILSNALKRGEIIA
KQGGGGGGGSVPGIERMGPGIDRIGGAGMERMGAGLGHGMDRVGSEMERMGLVMDRMGSV
ERMGSGIERMGPLGLDHMASSIERMGQTMERIGSGVERMGAGMGFGLERMAAPIDRVGQT
IERMGSGVERMGPAIERMGLSMERMVPAGMGAGLERMGPVMDRMATGLERMGANNLERMG
LERMGANSLERMGLERMGANSLERMGPAMGPALGAGIERMGLAMGGGGGASFDRAIEMER
GNFGGSFAGSFGGAGGHAPGVARKACQIFVRNLPFDFTWKMLKDKFNECGHVLYADIKME
NGKSKGCGVVKFESPEVAERACRMMNGMKLSGREIDVRIDRNA
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atggcggcaggggtcgaagcagcggcggaggtgacggcgacggagcccaaaatggaggaa
gaaagcggcgcgcccggcgtgccaagcggcaacggggctccgggtccgaagggtgaagga
gaacgacctactcagaatgagaagaggaaggagaaaaacataaaaagaggaggcagccgc
tttgagccctacgccaacccaactaaaagatacagagccttcattacaaacatacctttt
gatgtgaaatggcagtcacttaaagacctggttaaagaaaaagttggtgaggtaacatac
gtggagctcttaatggacgctgaaggaaagtcaaggggatgtgctgttgttgaattcaag
atggaagagagcatgaaaaaagctgctgaagttctaaacaagcatagtctgagtggaaga
ccactgaaagtcaaagaagatcctgatggtgaacatgccaggagagcaatgcaaaaggtg
atggctacgactggtgggatgggtatgggacctggtggcccaggaatgattaatatccca
cccagtatcctaaataatcccaacatcccaaatgagattatccatgcattgcaggctgga
agacttggaagcacagtgtttgtagcaaatctggattataaagttggctggaagaaactg
aaggaagtgtttagtatggctggtgtggtggtccgagcagacattctggaggataaagat
gggaaaagtcgcgggataggcactgtgactttcgagcagtccatcgaagctgtgcaagct
atatctatgtttaatggccagctgctatttgatagaccaatgcacgtcaaaatggatgag
agggctttaccaaagggagactttttccctcctgaacgtccccagcaacttccccatgga
cttggtggtattggcatgggtttggggccaggagggcagcctattgatgccaatcaccta
aacaagggcatcggcatgggaaacataggacctgcaggaatgggaatggaaggcatagga
tttggaataaataaaatgggaggcatggagggaccctttggtggtggtatggaaaacatg
gggcgatttggatctgggatgaacatgggccggataaatgagatggaacgtggcatgggt
gcaggatttgagagagactttgccagaaacgagatgggaatggctcgaagctttggagag
ccccttggcagaggaatggaaatcctaagtaatgcactgaagagaggagagatcattgca
aagcagggaggaggtggaggaggtggcagcgtccccgggatcgagaggatgggccctggc
attgaccgcattgggggggccggcatggagcgcatgggcgccggcctgggccacggcatg
gatcgagttggctccgagatggagcgcatgggcctagtcatggaccgcatgggctctgtg
gagcgcatgggctctggcattgagcgcatgggccccctgggtctcgaccacatggcctcc
agcatcgagcgtatgggccagaccatggagcgcattggctccggagtggagcgcatgggt
gccggcatgggctttggcctggagcgcatggccgcgcccatcgaccgcgtgggccagacc
attgagcgcatgggctctggtgtggagcgtatgggccctgccatcgaacgcatgggcctg
agcatggagcgcatggtgcccgcaggcatgggggccggcctggagcgcatgggccccgtg
atggatcgcatggccactggtctggagcgcatgggcgccaacaacctggagcgcatgggc
ctcgagcgcatgggtgccaacagtcttgagcggatgggcctggagcgcatgggcgccaac
agtctcgagcggatgggccctgccatgggaccagccttaggtgctggcattgagcgaatg
ggcctggccatgggaggcggtggaggtgccagcttcgatcgcgccattgagatggagcgt
ggaaactttggaggaagcttcgcaggttcctttggtggagccggaggccatgctcctggg
gtggccagaaaggcctgccagatattcgtaagaaatctcccatttgattttacttggaag
atgctaaaggacaaattcaacgaatgtggccacgtgctgtatgctgacatcaagatggag
aatgggaagtccaaggggtgcggtgtggttaagtttgagtcgccagaggtagccgaaaga
gcctgccggatgatgaacggcatgaagctgagtggccgggagatagatgttcgaattgat
agaaatgcttaa
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