Dipodomys spectabilis (banner-tailed kangaroo rat): 122119571
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Entry
122119571 CDS
T07891
Symbol
Rnf43
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
122119571 (Rnf43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dsp04121
]
122119571 (Rnf43)
Enzymes [BR:
dsp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122119571 (Rnf43)
Ubiquitin system [BR:
dsp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122119571 (Rnf43)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-RING_5
DUF4381
zf-ANAPC11
zf-C3H2C3
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
122119571
NCBI-ProteinID:
XP_042549520
LinkDB
All DBs
Position
Unknown
AA seq
662 aa
AA seq
DB search
MAGERGASAVLFDITEDRAAAEQLQQPLGLAWPVVLIWGNDAEKLMEFVYKNRKAHVRIE
LKEPPAWPDYDVWILLTVVGTIFVIILASVLRIRCRPRHSRPDPLQQRTAWAISQLATRR
YRTSCRRARAEQTDSVSSCSSAPMCAICLEEFSEGQELRVISCLHEFHRTCVDPWLHQHR
TCPLCMFNIIEGDSFSQALGPSQSYQEPGRRLHLIRQHPGHAYYHLPPAYLLGPPRNSAA
RPPRPRPFLPSQEPSMGPRHQRLSRAPHAQAPCEQPHLAVTQHPYAQGWGLSRLQCPSQH
PTACPVPLRRARPHDSSGSGESYCTERSGYLADGPASDSSSGPCHGSSSDSVVNCTDISL
QGIHGSSSTFRSSLSSDFDPLVYCGHEGDLPGKGRHPTVASRPRSLDSVVPTGETQVSSH
IHYHRHRHHHYKKRFQWHGRKPGPETGVPQSRPVSRTQTQPEPPLSGQQISRPDLATPSS
QLPNPPRLRALTEPAPGAAGATEATEPGRPGNLQPSSLCNLQKSSLPARHPQRKRQGGPS
EPRPASRPQDLTMHPVCQISPPYSPSLAYPWPPEAHPLIFRPPGMDRKLLSEAPDSGYPS
SQPVWLCLTSRRPLGPERPGEGPSEWSFGTPEGRPCPYPHCQVLPAQPGSEEELEELCEQ
AV
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtgagcgaggagccagtgctgtcctctttgacatcactgaggatcgagctgct
gctgagcagctacagcaacccctggggctggcctggccagtggtgctgatctggggtaat
gatgctgagaagctgatggagttcgtgtacaagaaccgcaaggcccacgtgaggattgaa
ctgaaggagcctccagcctggccagattatgatgtgtggatactcctgacagtggtgggc
accatctttgtgatcatcctggcttcagtgctgcggatcaggtgccgccctcgccatagc
aggccggaccctcttcagcagcgcacggcctgggccatcagccagctggccaccaggagg
taccggaccagctgcaggagggctcgggctgagcagactgattcagtcagtagctgtagc
tctgcccccatgtgtgccatctgcctggaggaattctctgaggggcaggaactacgggtc
atttcctgcctccatgagttccatcgtacctgtgtggacccctggctacatcagcatcgg
acctgtcccctctgcatgttcaacatcatagagggagattcattctcccaggccttggga
ccatctcaatcttatcaggaaccaggcaggagactccatctcattcgccagcatccaggc
catgcttactaccacctccctcctgcctacctgttgggccctccccggaattcagcggcc
cggcccccacgacctagacccttcttaccatcccaggagccaagcatgggccctcgacat
caacgcctctccagggctccgcatgcccaggctccctgcgagcagccgcatctggcagtg
acccagcacccctatgcacagggctggggcctgagccgactgcagtgcccttctcagcat
cccacagcctgccccgtgcccctgcgcagggccaggcctcacgacagcagtgggtctgga
gaaagctactgcacagaacgcagtggctacctggccgatgggccagccagtgactccagc
tccgggccctgccatggttcctccagtgactcagtggtcaactgcacggacatcagccta
cagggcatccatggcagcagctccaccttccgcagctccctgagcagcgactttgacccc
ttggtatactgtggccatgaaggggatctgccaggcaaggggaggcacccaactgtggcc
tctagaccccgttctctggactcagtggtgcccacaggagaaactcaggtttccagccat
atccactaccaccggcaccggcatcaccactacaaaaagaggttccagtggcatggcagg
aagcctggaccagaaactggggtcccccagtctaggcctgtttctcggacacagacacag
cctgagccacctttgtctggtcaacaaatcagcagacccgacctagcaaccccatcaagc
cagctccccaacccgccacggctcagagcccttacagagccagcccctggagccgccgga
gccaccgaagccaccgaacctggcagacctggcaacttgcaacccagcagcctttgcaac
ttgcagaaatctagcctccccgcacgacatccacagaggaaacggcaagggggtccctca
gagcccaggccagcctctcggccccaggatttgactatgcacccagtttgtcagatctcc
ccaccttacagccccagcttggcatacccttggcccccagaagcccacccactaatcttc
agacctccaggcatggataggaagctgctatcagaagccccagactccggctacccaagc
tcacagccagtgtggttatgtctgacttcacgccggcccctaggaccagaaaggccaggg
gaagggccttctgaatggagttttggtactccagagggcaggccgtgcccttacccacac
tgccaggtgctaccagcccaacctggctcggaggaggagctcgaggagctgtgtgaacag
gctgtgtga
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integrated database retrieval system
