Dipodomys spectabilis (banner-tailed kangaroo rat): 122119761
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Entry
122119761 CDS
T07891
Symbol
Atg4d
Name
(RefSeq) cysteine protease ATG4D isoform X1
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp04136
Autophagy - other
dsp04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
122119761 (Atg4d)
04136 Autophagy - other
122119761 (Atg4d)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
dsp01002
]
122119761 (Atg4d)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dsp04131
]
122119761 (Atg4d)
03029 Mitochondrial biogenesis [BR:
dsp03029
]
122119761 (Atg4d)
Peptidases and inhibitors [BR:
dsp01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
122119761 (Atg4d)
Membrane trafficking [BR:
dsp04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
122119761 (Atg4d)
Mitochondrial biogenesis [BR:
dsp03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
122119761 (Atg4d)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C54
YIEGIA_cap
Motif
Other DBs
NCBI-GeneID:
122119761
NCBI-ProteinID:
XP_042549743
LinkDB
All DBs
Position
Unknown
AA seq
473 aa
AA seq
DB search
MNSVSPAAAQYRSGSPEDARRPEGRRPRGPRVPDPSGRGGSGAGAPARGPSGAAPGEPDE
VDKFKARFLTAWNNVKYGWAVKSRTSFSKISSVHVCGRRYRFEGEGDIQRFQRDFVSRLW
LTYRRDFPPLAGGCLTSDCGWGCMLRTGQMMLAQGLLLHFLPKDWTWAEASGLATAELST
LASPGRPRGPPRRLPPHWAQGAPELEQERWHRRIVSWFADRPQAPFGLHRLVELGQSSGK
KAGDWYGPSLVAHILRKAVESCGDVSRLAVYVSQDCTVYKADVARLVARPDPTAEWKSVI
ILVPVRLGGETLNPVYVPCVKELLRSELCLGIIGGKPRHSLYFIGYQDDFLLYLDPHYCQ
PTVDVSQADFPLESFHCTSPRKMAFAKMDPSCTIGFYARDRKEFERLCSELTRVLSSSSA
SERYPMFTVAEGQAQDLGLDDLCGPAAQPAPRPPRAGPLLKAKRPSSEDFVFL
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgaactccgtgtccccggccgccgcgcagtaccggagcgggagcccggaggacgcgcgc
cggcccgaggggcgcaggccacgggggccccgcgtcccggatcccagcggccgggggggc
tccggcgccggcgcccccgcccggggcccgtccggggccgccccgggggagccggacgag
gtggacaagttcaaagccaggttcctgaccgcctggaacaacgtcaagtacggttgggca
gttaaaagccggacgagttttagtaagatctccagcgttcacgtctgtggccgccgctat
cgttttgaaggcgagggtgacatccagcgattccaaagggacttcgtgtcccgtctgtgg
ctcacctatcgcagggacttcccacccctggctggaggctgcctgacctccgactgtggc
tggggatgcatgttacgcacaggtcagatgatgctcgcccagggcctgctactgcatttc
ctgcccaaagattggacgtgggcagaggcctcaggcctggccacggccgagctgtccacc
ttggcctctccaggccggcctcgggggcctccccgccggctgcctcctcactgggcccag
ggagcccccgagctggagcaggaacgttggcaccggcggattgtgtcctggttcgccgat
cggccgcaggcccccttcggcctccatcggctggtggagcttgggcagagctcaggcaag
aaagccggggactggtatggaccttcgctggtggcccacatcctgaggaaagcggtggag
agctgcggtgatgtcagccgcctggcggtgtacgtgtctcaggattgtacagtgtacaag
gcagatgtggcacgcctggtggccaggcccgaccccacagcagagtggaagtccgtcatc
atcctggtccctgtgcggctgggaggcgagacgctcaaccctgtgtacgtgccctgcgtg
aaggagctgctgcggtctgaactgtgcctgggcatcatagggggcaaaccccgccactcc
ctctacttcattggctaccaggatgacttcctgctctatctggacccccactactgccag
cccactgtggatgtcagccaagctgacttccccctagagtctttccattgcacctcaccc
cgcaagatggccttcgccaagatggaccccagctgtaccatagggttctacgccagagac
aggaaggagtttgagaggctctgttccgagctgaccagggtgctcagctcctcctcggcc
tcggagcgctaccccatgttcaccgtggccgagggccaggcgcaggacctgggcctggac
gacctctgcggcccggccgcgcagcccgcgccccggccgccccgcgcggggcccctcctc
aaggccaagcggcccagctccgaggacttcgtgtttttatag
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