Entry |
|
Symbol |
Ddx39a
|
Name |
(RefSeq) ATP-dependent RNA helicase DDX39A
|
KO |
|
Organism |
dsp Dipodomys spectabilis (banner-tailed kangaroo rat)
|
Brite |
KEGG Orthology (KO) [BR:dsp00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:dsp03041]
122119803 (Ddx39a)
Enzymes [BR:dsp01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122119803 (Ddx39a)
Spliceosome [BR:dsp03041]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
122119803 (Ddx39a)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
Unknown
|
AA seq |
427 aa
MAEQDVENELLDYEEDEEPQAPPESTPAPPKKDVKGSYVSIHSSGFRDFLLKPELLRAIV
DCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPVSSQVVVLVMCH
TRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEEVLKKNCPHVVVGTPGRILALVR
NRTLNLRNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKEIRPVCRK
FMQDPMEVFVDDETKLTLHGLQQYYVKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVQRCM
ALAQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFN
YDMPEDSDTYLHRVARAGRFGTKGLAVTFVSDENDAKILNDVQDRFEVNVAELPEEIDIS
TYIEQSR |
NT seq |
1284 nt +upstreamnt +downstreamnt
atggcagagcaggacgtggagaatgagcttttggattacgaggaggatgaagagccccag
gcccctccggagagcacccccgctccccccaagaaggacgtcaagggctcctacgtgtcc
atccacagctcgggcttccgggacttcctgctgaagcccgagctgctccgcgccatcgtg
gactgcggcttcgagcacccgtcggaagtgcagcacgagtgcatcccccaggccatcctg
ggcatggacgtcctgtgccaggccaagtccgggatgggcaagaccgccgtgttcgtgctg
gccaccctgcagcagatcgagcccgtcagcagccaggtggtggtgctggtcatgtgccac
acgagggagctggccttccagatcagcaaggagtacgagcgcttctccaagtacatgccc
agcgtcaaggtgtccgtgttcttcgggggcctctccatcaagaaggacgaggaagtgctg
aagaagaactgtccgcacgtggtggtggggacgccgggccggatcctggcgctcgtgcgg
aaccgaaccctcaacctgcggaacgtgaagcacttcgtgctggacgagtgtgacaagatg
ctggagcagctggacatgcggcgggacgtgcaggagatcttccggctgaccccgcacgag
aagcagtgcatgatgttcagcgccaccctgagcaaggagatccggcccgtgtgcaggaag
ttcatgcaggaccccatggaggtgtttgtggacgacgagacgaagctcacgctgcacggg
ctgcagcagtactatgtgaagctcaaggacagcgagaagaaccgcaagctcttcgacctg
ctggacgtgctggagtttaaccaggtggtgatcttcgtgaagtctgtacagcgctgcatg
gcgctggcgcagctcctggtggagcagaacttcccggccatcgccatccaccggggcatg
gcccaggaggagcgcctgtcccgctaccagcagttcaaggacttccagcgccgcatcctg
gtggccaccaacctgttcggccggggcatggacatcgagcgggtcaacatcgtcttcaat
tacgacatgcccgaggactcggacacctacctacaccgcgtggcccgcgccggccgattt
ggcaccaaaggcctggccgtcacgttcgtgtccgatgagaatgacgccaagatcctcaac
gacgtgcaggaccgcttcgaggtgaacgtggccgagctgccggaagagatcgacatctcc
acatacattgagcagagccggtaa |