KEGG   Dipodomys spectabilis (banner-tailed kangaroo rat): 122119803
Entry
122119803         CDS       T07891                                 
Symbol
Ddx39a
Name
(RefSeq) ATP-dependent RNA helicase DDX39A
  KO
K13182  ATP-dependent RNA helicase DDX39 [EC:5.6.2.7]
Organism
dsp  Dipodomys spectabilis (banner-tailed kangaroo rat)
Brite
KEGG Orthology (KO) [BR:dsp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:dsp03041]
    122119803 (Ddx39a)
Enzymes [BR:dsp01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     122119803 (Ddx39a)
Spliceosome [BR:dsp03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA helicase-like proteins
    122119803 (Ddx39a)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII CMS1 Cas3-like_C_2
Other DBs
NCBI-GeneID: 122119803
NCBI-ProteinID: XP_042549800
LinkDB
Position
Unknown
AA seq 427 aa
MAEQDVENELLDYEEDEEPQAPPESTPAPPKKDVKGSYVSIHSSGFRDFLLKPELLRAIV
DCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPVSSQVVVLVMCH
TRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEEVLKKNCPHVVVGTPGRILALVR
NRTLNLRNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKEIRPVCRK
FMQDPMEVFVDDETKLTLHGLQQYYVKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVQRCM
ALAQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFN
YDMPEDSDTYLHRVARAGRFGTKGLAVTFVSDENDAKILNDVQDRFEVNVAELPEEIDIS
TYIEQSR
NT seq 1284 nt   +upstreamnt  +downstreamnt
atggcagagcaggacgtggagaatgagcttttggattacgaggaggatgaagagccccag
gcccctccggagagcacccccgctccccccaagaaggacgtcaagggctcctacgtgtcc
atccacagctcgggcttccgggacttcctgctgaagcccgagctgctccgcgccatcgtg
gactgcggcttcgagcacccgtcggaagtgcagcacgagtgcatcccccaggccatcctg
ggcatggacgtcctgtgccaggccaagtccgggatgggcaagaccgccgtgttcgtgctg
gccaccctgcagcagatcgagcccgtcagcagccaggtggtggtgctggtcatgtgccac
acgagggagctggccttccagatcagcaaggagtacgagcgcttctccaagtacatgccc
agcgtcaaggtgtccgtgttcttcgggggcctctccatcaagaaggacgaggaagtgctg
aagaagaactgtccgcacgtggtggtggggacgccgggccggatcctggcgctcgtgcgg
aaccgaaccctcaacctgcggaacgtgaagcacttcgtgctggacgagtgtgacaagatg
ctggagcagctggacatgcggcgggacgtgcaggagatcttccggctgaccccgcacgag
aagcagtgcatgatgttcagcgccaccctgagcaaggagatccggcccgtgtgcaggaag
ttcatgcaggaccccatggaggtgtttgtggacgacgagacgaagctcacgctgcacggg
ctgcagcagtactatgtgaagctcaaggacagcgagaagaaccgcaagctcttcgacctg
ctggacgtgctggagtttaaccaggtggtgatcttcgtgaagtctgtacagcgctgcatg
gcgctggcgcagctcctggtggagcagaacttcccggccatcgccatccaccggggcatg
gcccaggaggagcgcctgtcccgctaccagcagttcaaggacttccagcgccgcatcctg
gtggccaccaacctgttcggccggggcatggacatcgagcgggtcaacatcgtcttcaat
tacgacatgcccgaggactcggacacctacctacaccgcgtggcccgcgccggccgattt
ggcaccaaaggcctggccgtcacgttcgtgtccgatgagaatgacgccaagatcctcaac
gacgtgcaggaccgcttcgaggtgaacgtggccgagctgccggaagagatcgacatctcc
acatacattgagcagagccggtaa

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