Dipodomys spectabilis (banner-tailed kangaroo rat): 122120241
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Entry
122120241 CDS
T07891
Symbol
Rbm39
Name
(RefSeq) RNA-binding protein 39 isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dsp03041
]
122120241 (Rbm39)
Spliceosome [BR:
dsp03041
]
Common components
Common spliceosomal components
General mRNP proteins
122120241 (Rbm39)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RBD_DEAH11
RRM_7
POP1_C
IHO1
Motif
Other DBs
NCBI-GeneID:
122120241
NCBI-ProteinID:
XP_042550340
LinkDB
All DBs
Position
Unknown
AA seq
530 aa
AA seq
DB search
MADDIDIEAMLEAPYKKDENKLSSANGHEERSKKRKKSKSRSRSHERKRSKSKERKRSRD
RERKKSKSRERKRSRSKERRRSRSRSRDRRFRGRYRSPYSGPKFNSAIRGKIGLPHSIKL
SRRRSRSKSPFRKDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVR
DVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMAN
NLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSD
SECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTTGRLQLM
ARLAEGTGLQIPPAAQQALQMSGSLAFGAVAEFSFVIDLQTRLSQQTEASALAAAASVQP
LATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPS
IAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLFPDSMTATQLLVPSRR
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgatattgatattgaagcaatgcttgaggctccttataagaaggatgagaac
aagttgagcagtgctaacggccatgaagaacgtagcaaaaagaggaaaaaaagcaagagc
agaagtcgtagtcatgaacgcaagagaagcaaaagtaaggaacgtaagcgaagtagagat
agagaaaggaaaaagagcaaaagccgagaaaggaagcgcagtagaagcaaagaaaggaga
cgaagccgctcacgaagtcgagatcgcagattccgaggccgctacagaagtccctactcc
ggaccaaaatttaacagtgccatccgaggaaagattgggttgcctcatagcatcaaatta
agtagacgacgttcccgaagcaaaagtccattcaggaaagacaagagccctgtgagggag
cctattgacaatctaactcctgaggaaagagatgcaaggacagttttctgtatgcagctg
gcagcaagaattcgaccaagggatttagaagaatttttctctacagtaggaaaggttcgt
gatgtaaggatgatttctgatagaaactcaagacgttccaaaggaattgcttatgtggaa
tttgtggatgttagctcagtgcctctcgcaattggattaactggccagcgagttttagga
gtgccaattatagtacaggcatcacaggctgagaaaaacagagctgcagcaatggcaaat
aatttacaaaaaggcagtgctgggcctatgaggctttatgtaggctcattacactttaac
ataactgaggatatgcttcgtgggatctttgagccttttggaaggattgaaagtatccag
ctcatgatggatagtgaaacaggtcgatctaaaggatatggttttattaccttttcagac
tcagagtgtgccaaaaaggctttggaacaacttaatggatttgaactagcaggaaggcca
atgaaagttggtcatgttactgaacgaactgatgcttctagtgctagttcatttttggat
agtgatgaactggaaaggactggaattgatttgggaacaactggtcgtctccaattaatg
gcaagacttgcagagggcacaggtttgcagattccaccagcagcacagcaagctttacaa
atgagtggctctttggcatttggtgctgtggcagaattctcttttgttatagatttgcaa
acacgactttcacaacagactgaagcttcagctttagctgcagccgcttctgtccaacca
cttgcaacacaatgtttccagctgtctaacatgtttaatcctcaaacagaagaagaagtt
ggatgggatacagagatcaaagatgatgtgattgaagaatgtaataaacatggaggtgtt
attcatatttatgtcgacaaaaattcagctcagggcaacgtgtatgtgaagtgcccatca
attgctgcagctattgctgctgttaatgcattgcatggcaggtggtttgctggtaaaatg
ataacagcagcatatgtacctcttccaacttaccacaacctgttccctgattctatgaca
gcaacacaactactggttccaagtagacgatga
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