Dipodomys spectabilis (banner-tailed kangaroo rat): 122120556
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Entry
122120556 CDS
T07891
Symbol
Srsf6
Name
(RefSeq) serine/arginine-rich splicing factor 6 isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp03040
Spliceosome
dsp05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122120556 (Srsf6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dsp03041
]
122120556 (Srsf6)
Spliceosome [BR:
dsp03041
]
Common components
Common spliceosomal components
SR proteins
122120556 (Srsf6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
122120556
NCBI-ProteinID:
XP_042550761
LinkDB
All DBs
Position
Unknown
AA seq
344 aa
AA seq
DB search
MPRVYIGRLSYNVREKDIQRFFSGYGRLLEVDLKNGYGFVEFEDSRDADDAVYELNGKEL
CGERVIVEHARGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLIVENLSSR
CSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLDGTEINGRNIRLIE
DKPRTSHRRSYSGSRSRSRSRRRSRSRSRRSSRSRSRSISKSRSRSRSRSKGRSRSRSKG
RKSRSKSKSKPKSDRGSHSHSRSRSKDEYEKSRSRSRSRSRSPKENGKGDIKSKSRSRSQ
SRSHSPLPVAPSKARSVSPPPKRATSRSRSRSHSRSRSRSSSRD
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgcgtctacataggacgcctgagttataacgtccgggagaaggacatccagcgt
tttttcagcggctacggccgcctcctcgaagtagatctcaaaaatgggtacggcttcgtg
gagttcgaggactcccgagacgccgacgatgccgtttacgagctgaacggcaaggagctg
tgcggggagcgcgtgatcgtggagcatgcccggggccctcgccgggatcgcgacggctac
agctacggaagccgcagtggtggaggtggatacagcagtcggagaacctctggcagagac
aaatatggaccacctgttcgtacagaatacagacttattgtagaaaatctttctagtcgt
tgtagttggcaagatttaaaggatttcatgcggcaagcaggggaagtaacatatgcagat
gctcacaaagaacgcacaaatgagggtgtaattgaatttcgctcctactcagacatgaag
cgagcattggataaactggatggtacagaaataaatggcagaaatattaggcttattgaa
gataagccacgaacaagccataggcggtcttattctggaagcagatccagatcacgttct
agaagaaggtcacgaagtaggagtcggagaagcagccgcagtagatctcggagtatctca
aaaagtcgctcccgatccaggtctcggagcaaaggtcgatcacggtctcgatcaaaaggc
aggaagtcgagatcaaagagcaaatctaagcccaagtccgatcggggctctcactcacac
tcccgaagcagatctaaggatgagtatgagaaatcccgaagcagatctcgctctcgatct
cggtcccccaaagaaaatggaaaaggtgatattaagtcaaagtccagatcaaggagccag
tctcgttcccattcacccctacctgttgcaccctcaaaagcccgttctgtgtcccctcct
ccaaaaagagctacttcaagatcccggtctagatctcattcaagatcgaggtctagatca
agttccagagattaa
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