Dipodomys spectabilis (banner-tailed kangaroo rat): 122120885
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Entry
122120885 CDS
T07891
Symbol
Nod1
Name
(RefSeq) nucleotide-binding oligomerization domain-containing protein 1 isoform X1
KO
K08727
nucleotide-binding oligomerization domain-containing protein 1
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp04621
NOD-like receptor signaling pathway
dsp05132
Salmonella infection
dsp05133
Pertussis
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
122120885 (Nod1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
122120885 (Nod1)
05133 Pertussis
122120885 (Nod1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
dsp04054
]
122120885 (Nod1)
Pattern recognition receptors [BR:
dsp04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
122120885 (Nod1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
LRR_6
CARD
NLRC4_HD2
LRR_4
NOD2_WH
AAA_16
wHTH-PRTase_assc
ABC_tran
DLIC
AAA_29
LRR_8
Motif
Other DBs
NCBI-GeneID:
122120885
NCBI-ProteinID:
XP_042551069
LinkDB
All DBs
Position
Unknown
AA seq
961 aa
AA seq
DB search
MEKQDVITSHSDSYIKLLKTNRELLVAHIHNTQCLLDNLLENGYLLAEDVEIVCACTTQP
GKVQEQVRNLLDLVQSKGEEVSEFFLYVLQQLTDAFVDLQPWLLEIGFSPSQLIQSKTIV
NTDPVSRYTQQLRHLGDCDSGFLPSYAQGSERELPLEEVYEDPVLELLGPDDESLGPLSG
PPWLLDPDPGVLGGQGEAVLVLGDAGAGKSALLQRLQGLWAAGRLGAELRFFFLFRCRAL
GGLGAGAALRLQDLLFRHCCFPECGADEVFAFLLRFPRLALLAFDGLDELPSDFDPSRAP
DSCSPWEPAPPMALLAALLSGRLLSGTRKLLTARTGTALPRNLLRAKVRLRGFGPLQLRN
YARRVVPDRAARERLLQQLDAHPGLGGLCAVPLFCGLVFRCCASLCDTREDSGVLTLTDV
YLRVAEVHLRRAQPRSLVQHPARCSAETLRAGRHALRALGRVALRGTERGRFVFGPDEVR
VSELREGSAQLLPLGFLRALPAPGPEPGRRVFEFLHLTLQAFFAAFFLVVDDGVGTRELL
RFLGTGTGAADGDADGDGDSDASAGACHPCLPAPCLRDCISAGLVPSSGKDHLQFTNLFL
CGLLAKARQRLLQTLVPAAALRRKRRALCTHLLNRLRAHLQGLPRLQSGGFRQVQAMPAF
LWMLRCLYETQSRKVGWRAARGIRADYLKLAFCNACPADCSSLAFVLRHLPTRLALDLDN
NNLNDFGVRELQPCFSHLTVLRLSVNHITDTGVKVLSEELTKYKIVTYLGLYNNQITDIG
ARYVARILDECRSLTHLKLGKNKITSEGAKCLAQAVKNSTSIFDIGMWGNQIGDEGAAAF
AEALRDHPSLNNLSLAFNGISTEGGKSLAQALKQNTSLEIFWLTKNELNDEVAESFAEML
KVNQNLKHLWLIQNQITAKGTALLAEALQENSSLTELCLNGNLIKPEEAKVFGDEKRLIC
F
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagcaggatgttatcacatcacattctgactcctacattaaactactgaagacc
aatcgagagctgctggtcgcccacatccacaacacacagtgtctgctggacaacctgctg
gagaatggctatctcttggctgaagacgtggagattgtgtgtgcctgcaccactcagcct
ggcaaggtgcaggaacaggttcgaaaccttctggacctggtacagagcaagggcgaggag
gtgtctgagttcttcctctatgtgctccagcaactcacagatgcatttgtggacctccag
ccatggctgctggagatcggcttctccccttcccagctaattcagagcaaaactattgtc
aacactgacccagtgagcaggtacacccagcagctgcggcacctgggggactgcgactcc
gggttcctgccgagttacgcacagggcagcgagcgcgagctgccgctggaggaggtctac
gaggacccggtcctggagctgctgggccccgatgacgagagtctgggccctctgagtggc
ccaccctggctgctggaccccgatcctggcgtcctcggcgggcagggggaggctgtgctg
gtgctgggcgacgcgggcgcggggaagtcggcgctgctgcagcggctgcaggggctgtgg
gcagcggggcgcctgggcgccgagctccgcttctttttcctcttccgctgccgcgcgctc
ggcgggctgggcgcgggcgctgcgctgcgcctgcaggacctgctcttccgccactgctgc
ttcccagagtgcggcgccgacgaggtcttcgccttcctgctgcgcttcccgcgcttggcg
ctgctggccttcgacggcctggacgagctgccctccgacttcgatccgagccgcgcgccc
gacagctgcagcccctgggagcccgcgccgccgatggcgctgctggcggcgctattgagt
ggccggctgctgtcgggcacgcgcaagctgctgacggcgcgcacgggcacggcgctcccg
cgcaacctcttgcgcgccaaggtgcggctgcgcggcttcggcccgcttcagctgcgcaac
tacgcgcgccgcgtggtgccggaccgcgccgcgcgcgagcgcctgctacagcagctggac
gcccaccccggcctgggcggcctctgcgccgtgccgctgttctgcggcctcgtcttccgc
tgctgcgcaagcctttgcgacacccgggaggactccggcgtgctgactctgaccgacgtc
tacctgcgggtcgccgaggtccacctgcgtcgggcgcaacctcgcagcctggtgcagcac
ccggcgcgctgctcggccgagaccctgcgcgcggggcggcacgcgctgcgggcgctgggc
cgcgtggcgcttcgcggcaccgagcgcggccgcttcgtctttggccccgacgaggtgcgg
gtgtcggagctgcgggagggcagcgcgcagctcctgccactgggcttccttcgggccctg
cccgcgcccgggcccgagccgggccgccgcgtcttcgagttcctgcacctaacactccag
gccttcttcgctgccttcttcctggtggtggacgatggggtgggaacccgggagctgctg
cggttcttgggaaccgggacgggggcggcggatggagatgcggacggagatggggactca
gatgcctctgcaggcgcctgccacccctgccttccggccccgtgcctgcgcgactgcatc
tccgccggcctcgtgccctcctccggcaaggaccacctccagttcaccaatctcttcttg
tgcgggcttctggccaaggccaggcagaggctcctgcagaccctggtgcccgcggctgcc
ttacggaggaagcgcagggccctgtgcacccacctactcaaccgcctgcgcgcccacctg
caagggctgccacggctccagtccggcggcttccggcaggtgcaggccatgcccgcgttc
ctctggatgctgcgatgcctctatgagacgcagagccgcaaggtcgggtggcgcgcggcg
cgcggcatccgcgctgactacctcaagctggccttctgcaacgcctgtccggccgactgc
agctccctggccttcgtcctgcgccacctgcccactcgcctggccctagacctggacaac
aacaacctcaacgactttggcgtgcgtgagctgcagccctgcttcagccacctcacggtc
ctcagactcagtgtcaaccacatcactgatactggggtgaaagtgctgagtgaagagctg
accaagtacaagattgtgacatatttgggtttgtacaacaaccagatcactgacattggc
gccaggtatgttgcacgaatcctggatgaatgcagaagcctcacacacctaaaactgggc
aaaaacaaaataacaagtgaaggtgcaaagtgcctggcccaggctgtgaagaacagcacg
tcgatctttgatattgggatgtggggcaatcaaatcggggatgaaggagctgcagctttc
gcagaggctctgagggaccaccccagcctgaacaacctgagtcttgcgttcaacggcatc
tccacagaaggagggaagagcctggcacaggccttgaagcagaacacttctctggagata
ttttggctgaccaaaaatgaactgaatgatgaagtggcggagagctttgcagaaatgttg
aaagtcaaccagaatttgaagcatttatggctcatccagaatcagatcacagccaagggg
actgcgctgctggcagaggccctgcaggagaatagtagtctcacggagctttgtctaaat
ggaaatttgataaagccagaagaagccaaagtgtttggagatgagaagcggctcatctgc
ttctga
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