Dipodomys spectabilis (banner-tailed kangaroo rat): 122120983
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Entry
122120983 CDS
T07891
Symbol
Topors
Name
(RefSeq) E3 ubiquitin-protein ligase Topors isoform X1
KO
K10631
E3 ubiquitin-protein ligase Topors [EC:
2.3.2.27
]
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dsp04121
]
122120983 (Topors)
03036 Chromosome and associated proteins [BR:
dsp03036
]
122120983 (Topors)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
dsp03037
]
122120983 (Topors)
Enzymes [BR:
dsp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122120983 (Topors)
Ubiquitin system [BR:
dsp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122120983 (Topors)
UBL E3 ligases
122120983 (Topors)
Chromosome and associated proteins [BR:
dsp03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
122120983 (Topors)
Cilium and associated proteins [BR:
dsp03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
122120983 (Topors)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
zf-RING_UBOX
zf-rbx1
zf-RING_5
zf-C3HC4_4
zf-ANAPC11
RING_XB3-XBAT31
Rad50_zn_hook
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
122120983
NCBI-ProteinID:
XP_042551146
LinkDB
All DBs
Position
Unknown
AA seq
1064 aa
AA seq
DB search
MDPGSRGENGLKVARLWLSGGGSQQPPGSPLSREEGEAPPPAPAPEGRRRSRRVRLRGSC
RHRPTFLGHRDLASSASAGPASVSSEIMASAAKEFKMDNFSPKAGTSKLQQAVPADASPD
SKCPICLDRFDNVSYLDRCLHKFCFRCVQEWSKNKAECPLCKQPFDSIFHSVRAEDDFKE
YVLRPSYNGSFATPDRRFRYRTTMTRERSSSIYSPTTTVNRRTTTPPDSGVLFEGLGISR
SRDVEIPPIMRQITIRGPSAADDRTLRKIQEQDIINFRRTLYRAGARVRNIEDGGRYRDI
SAEFFRRNPACLHRLVPWLKRELTVLFGAHGSLVNIVQHIIMSNVTRYDLESQAFVSDLR
PFLLNRTEHFIHEFISFARSPFNMAAFDQHANYDCPAPSYEEGSHSDSSVITISPDETET
QELDINVATVSQAPWDDETPGPSYSSSEQVHVAMSSLLNTSDSSDEELVTGGATSQNQGV
QTNDDLHNDSDSSSDNCVIVGFVKPLAERTPELVELSSDSEELGSYDKMETVKSQEQEQS
SSSGDSDVSRCSTPRSVLGKDEQMNKVHHDSGTRMKSKKEGKRSTSLSSSRDLSSSMRED
RGCSPSNHRHRKRGRSRSSDSRSQSRSGHDQRNHRKHHGKKRMKSKRSRSRESSSRPRGR
RDKKSSRTRDSSWSRRSQTLSLSSESTSRSRSRSSDHGKRRSRSRTRDRYYLRNNYGSRY
KWEYTYYSRNKDRDGYESSYRRRTLSRAHYSRQSSSPEFRIQSFSERTNARKKNNHSERK
YYYYERHRSRSLSSNRSRTASTGPDRVRNEKPGGKRKYKTRHLESTNEVAQQTHEFTPKV
KDSHYQKPSKLDGSYKNESDSLSDGRSSDRETKHRRRKRRARSLSVEIVYEGKATDIAKH
HKKKKKKHKKKHKKHHGDNTRSPVVITIDSDSDKDSEVKANTECDNGVPPEALQNEYLAS
SLESFETNKDVVTIEDEFTVLDKECDVSTLTDNLNNASRTVNNIPPQAAAEVEQTLDVRE
ESIFASDLENQPINVSIHTEPSRQLPSPRTSLMSVSLGRDCDVS
NT seq
3195 nt
NT seq
+upstream
nt +downstream
nt
atggatccggggagtcggggagaaaatgggcttaaagttgctcgcttgtggctctccgga
ggggggtcgcagcagccgccggggtctccgctgtctcgcgaggagggcgaggcgcctccg
cctgctcccgccccggagggtaggcggagaagtcgccgtgtgcgccttcgcgggtcctgc
cggcatcgacctaccttcctgggccaccgggacctcgcctcgagtgcctccgccgggcct
gcgtcagtgtcttcggagataatggcatcagcagctaaggaatttaaaatggacaacttt
tcacctaaagctggcactagcaaattgcagcaggcagtaccagctgatgcatctccagat
tcaaaatgtcctatatgcttggacagatttgataatgtgtcttacttagatcgctgcttg
cataagttctgttttcgctgtgtacaggaatggtcaaaaaacaaagctgaatgtccactg
tgtaaacagccctttgactctatatttcattctgtgagggcagaagatgacttcaaggag
tatgtcctgagaccttcttataatggttcttttgccactcctgatcgacgatttcgctac
cgtaccactatgacacgggaacgaagtagttccatctattcacctactactactgtaaat
agaagaacgacaactccaccagatagtggagtgctgtttgaagggttaggcatctcaaga
tctagagatgttgaaattcctccaattatgagacagattacaataaggggaccatctgct
gcagatgatagaactttacggaaaattcaagagcaagatattattaattttagacgaacc
ctctatcgtgctggtgctcgagttagaaatattgaagatggtggtcgttacagggatatt
tcagctgaatttttccgtaggaatccagcttgccttcacagattagtcccttggctaaaa
cgtgaacttacagttctttttggagctcatggatcattagtcaatattgtccagcacatc
attatgagtaatgttactcgctatgacttggaaagtcaggcatttgtttctgatttaaga
ccatttttactgaatcggactgagcattttatacatgaatttatcagttttgctagatct
ccttttaacatggctgcctttgaccagcatgctaattatgactgccctgctccttcatat
gaagaaggcagccattctgattcttcagtcataacaatatctccggatgaaactgagacc
caggagttagatattaatgtagccactgtcagtcaggcaccatgggatgatgaaactcca
ggaccatcttactcaagctcagagcaggtacatgtagccatgtcttccctcttaaatact
tctgatagttcagatgaagaacttgtcacaggaggagccacttctcagaatcaaggtgta
caaaccaatgacgacctacataatgacagtgattcatcttcagacaactgtgtcattgtt
ggctttgttaagccattagctgagagaaccccagaactggttgaactatcctctgattct
gaggagttgggctcctatgacaaaatggagacagtgaagtcacaagaacaagagcagtct
tctagttctggtgatagtgatgttagtagatgttcaactccacgatctgtacttggaaag
gatgagcaaatgaataaagttcatcatgattctggtacaagaatgaaatcaaagaaggaa
gggaagcgatctacatcattgtcatcttccagagatctgagttcatctatgagagaagac
cgaggatgctccccatctaaccatagacacaggaagaggggaagatctagaagttcagat
tcacgttcccagagtagaagtgggcatgatcagcggaatcacaggaagcaccatgggaaa
aaaaggatgaagagcaaacggtccaggagcagggagagtagtagcagaccaagagggaga
cgagataagaagagttcgagaactagagatagcagctggtcgagaagaagccaaactctt
tctctaagtagtgaaagcacaagcagatcacggtctcgtagcagtgatcatggcaagaga
agatcacggagcagaaccagggaccgttactatttaagaaataactatggaagcagatat
aagtgggaatatacttattatagtagaaacaaggacagggatggttatgagtcatcttac
aggaggaggactctgtccagagcccattattctagacagtcttcaagtccagagttcaga
attcagtccttttctgaaagaacaaatgctcggaaaaaaaataatcacagtgagcggaaa
tattattattatgaaaggcacagatcaaggagcctgtctagtaataggtcaaggactgca
tctacaggacctgaccgggtgagaaatgaaaagcctggagggaagcgaaaatacaaaacc
cggcatttggagagtactaatgaggtggctcaacaaactcatgagttcactcctaaagta
aaggacagccattaccaaaagccatcaaaattggatggaagctataaaaatgagagtgac
agcttgtcagatggacgatcatcagacagagagacaaaacacaggaggaggaaaaggagg
gcccgtagcctcagtgtagaaatagtttatgaagggaaagctaccgatatagctaaacac
cataagaagaaaaagaagaaacacaagaaaaagcacaaaaaacatcatggagataatact
aggtccccagttgttattaccattgacagtgacagtgacaaggattcggaagtgaaggca
aacacggaatgtgacaatggtgttcctccagaggctctgcaaaatgagtatttggcttct
tccttggaatcgtttgaaactaataaagatgtagtcacaatagaagatgaatttactgtc
cttgacaaggagtgtgatgttagtacacttactgacaacttgaataatgccagcagaact
gtgaataatattccaccccaggcagcagctgaagttgaacagactcttgatgtaagagaa
gagagcatctttgcctctgatttggaaaaccagcccattaatgtttctattcacactgag
ccatccaggcaattgccatctccaaggacatcattaatgtcagtgtctcttggtagagac
tgtgatgtatcttaa
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integrated database retrieval system
