Dipodomys spectabilis (banner-tailed kangaroo rat): 122121136
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Entry
122121136 CDS
T07891
Symbol
Col6a2
Name
(RefSeq) collagen alpha-2(VI) chain isoform X1
KO
K06238
collagen type VI alpha
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp04151
PI3K-Akt signaling pathway
dsp04510
Focal adhesion
dsp04512
ECM-receptor interaction
dsp04820
Cytoskeleton in muscle cells
dsp04974
Protein digestion and absorption
dsp05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
122121136 (Col6a2)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
122121136 (Col6a2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
122121136 (Col6a2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
122121136 (Col6a2)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
122121136 (Col6a2)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
122121136 (Col6a2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dsp04147
]
122121136 (Col6a2)
00536 Glycosaminoglycan binding proteins [BR:
dsp00536
]
122121136 (Col6a2)
Exosome [BR:
dsp04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
122121136 (Col6a2)
Glycosaminoglycan binding proteins [BR:
dsp00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
122121136 (Col6a2)
Hyaluronan
Extracellular matrix or blood plasma proteins
122121136 (Col6a2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
VWA_3
Ins134_P3_kin_N
Motif
Other DBs
NCBI-GeneID:
122121136
NCBI-ProteinID:
XP_042551238
LinkDB
All DBs
Position
Unknown
AA seq
1020 aa
AA seq
DB search
MSWGPLSALLLWGLLGTLHGQQQEVISPDTTVERNNNCPEKADCPVNVYFVLDTSESVTM
QLPTDSLLHHMQQFVPQFISQLQNEFYLDQVALSWRYGGLHFSDQVEVFSPPGSDRASFT
KSLQGIRSFRRGTFTDCALANMTQEVRRHGGARSAVNFAVVVTDGHVTGSPCGGIKLQAE
RAREEGIRLFAVAPNRNLNEQGLRDIASTPHELYRSNYATMRSDSPEIDQDTINRIIKVM
KHEAYGECYKESCLEIPGPAGPKGYRGQKGAKGNMGEPGEPGQKGRQGDPGIEGPIGFPG
PKGVPGFKGEKGEFGADGRKGTPGLAGKNGTDGQKGKLGRIGPPGCKGDTGTRGPDGYPG
EAGSPGERGDQGAKGDSGRPGHRGPPGDPGDKGSKGYQGNHGAPGGPGVKGAKGGPGPRG
PKGEPGRRGDPGTKGSPGSDGPKGEKGDPGPEGPRGLAGEVGNKGAKGDRGLPGPRGPQG
ALGEPGKQGSRGDPGDAGPRGDSGQPGPKGDPGRPGFSYPGPRGTPGEKGEAGPQGPEGG
RGDFGLKGAPGRKGEKGEPADPGPPGEPGPRGPQGVPGPEGEPGPPGDPGLTECDVMTYV
RETCGCCDCEKRCGALDVVFVIDSSESIGYTNFTLEKNFVINVVNRLGAIAKDPKSETGT
RVGVVQYSHEGTFEAIQLDDERIDSLSSFKEAVKNLEWIAGGTWTPSALKFAYNQLIKES
RRKKTRVFAVVITDGRHDPRDDELSLRALCDRDVTVTAIGIGDMFHERHESESLHSIACD
RPQQVRNMTLFSDLVAEKFIDDMEDVLCPDPQIVCPELPCQTELSVAQCAQRPVDVVFLL
DGSERLGERNFHKALGFVEEVARRLPLAQGDADPLRARLALLQFGGPREQRVVFPLSSDP
AAIREALGSATYLNSFSHVGAGVVGAINDVAGRARGARRLAELNFVFLTDGVTGNHSLDE
AVHSMRKQNVVPTVVAVGGDVDMDVLTKIALGDRAAIFREKDFDSLVQPGFFDRFIRWIC
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atgagctggggccccctctccgcgctcctgctctgggggctcctggggacgctccacggc
cagcagcaggaggtcatctcacctgacaccaccgtcgagaggaacaacaactgcccagag
aaggccgactgcccagtcaatgtgtacttcgtgctggacacatcggagagtgtgaccatg
cagttgcccactgacagcctgctccaccacatgcagcagtttgtgccccagttcatcagc
cagctgcagaatgagttctacctggaccaggtggccctgagctggcgctacggcggcctg
cacttctccgaccaggtggaggtgttcagccccccgggcagcgaccgggcctccttcacc
aagagcctgcagggcatccgctccttccgcaggggcaccttcaccgactgcgcgctggcc
aacatgacgcaggaggtccggaggcacggcggggcccgcagcgcggtcaacttcgccgtg
gtggtcaccgacggccacgtcaccggcagcccctgcgggggcatcaagttgcaggccgag
cgcgcccgcgaggagggcatccggctctttgccgtggcccccaaccggaacctgaacgaa
cagggcctgagagacatcgccagcaccccacatgagctctaccgcagcaactacgccacc
atgcggtccgattcccccgaaatcgaccaggacaccatcaaccgcatcatcaaggtcatg
aagcacgaggcctatggggagtgctacaaggagagctgcttggagatccctggccctgca
ggccccaagggctaccgtgggcagaagggtgccaagggcaacatgggtgagccaggagaa
cctggacagaaggggcgacagggagatccaggcatcgaaggccccatcggattcccaggg
cccaagggtgttcctggcttcaaaggagagaagggggaattcggagcggatggtaggaag
ggaactcctggcctggctggcaagaacgggaccgatggacagaagggcaaactgggccgc
atcggaccccctggctgcaagggagacacaggaacccgaggccccgatgggtaccccgga
gaggccggaagcccaggagagcgaggagaccaaggtgccaagggagactccggccgccct
gggcacagggggcccccaggagaccccggggacaaagggagcaagggctaccaaggcaac
cacggagccccgggaggccccggcgtgaagggggccaagggcgggcctgggccccgcgga
cccaaaggggagccggggcgcaggggagaccccggaaccaagggcagcccgggcagtgac
gggcccaagggggagaagggagacccaggtcccgaggggccccggggtctggccggagaa
gtgggcaacaaaggagccaagggagacagaggattgcctgggcccagaggcccccagggg
gctctgggggagcctgggaagcagggttctcggggagatcccggtgacgctgggccccgg
ggggactcaggacagccgggtcccaagggagacccaggcaggcctggattcagctaccca
ggaccccgggggacacctggagagaaaggagaagccggcccccagggccctgagggaggc
cgaggagactttggcctgaaaggagcacctggaaggaaaggagagaagggagagcccgcg
gaccccgggccccctggtgagccgggaccccgcggaccacagggcgtgccaggacctgag
ggtgagcccggccccccgggagaccccggcctcacggagtgtgacgtcatgacctacgtg
cgggagacatgcgggtgctgtgactgtgagaagcgctgtggagccctggacgtggtcttc
gtcattgacagctcggagagcatcggctacaccaacttcaccctggagaagaacttcgtc
atcaacgtggtcaacaggctgggcgccatcgccaaggaccccaagtcagagacagggaca
cgcgtgggcgtggtgcagtacagccacgagggcaccttcgaggccatccagctggacgac
gagcgcatcgactccctgtccagcttcaaggaggccgtgaagaacctggagtggatcgcc
ggcgggacctggacgccgtccgccctcaagttcgcctacaaccagctcatcaaggaaagc
cggcgcaagaagacccgcgtgttcgcggtggtcatcacggacggccgccacgacccacgg
gatgatgagctcagcctgagggccctgtgcgaccgcgacgtgacggtgacggccatcggc
atcggggacatgttccacgagaggcacgagagcgagagcctgcactccatcgcctgcgac
agaccgcagcaggtgcggaacatgacgctcttctccgacctcgtggccgagaagttcatt
gacgacatggaggacgtgctctgcccagatcctcagatcgtgtgtccagagcttccctgc
caaacagagctgtcggtggcccagtgtgcgcagcggccggtggacgtggtcttcctgctg
gacggctcggagcggctgggcgagcggaacttccacaaggcgctgggctttgtggaggag
gtggcgcggcgcctgccactggctcagggggacgcggaccctctgcgtgcccgcctggcg
ctgctgcagttcgggggtccccgcgagcagcgcgtggtcttcccgctgagctccgacccc
gcggccatccgcgaggcgctgggcagcgccacctacctcaactccttctcgcacgtgggc
gcgggcgtggtgggggccatcaatgacgtggccgggcgcgcccgcggtgcccggcgcctg
gccgagctcaacttcgtcttcctcaccgacggtgtcaccggcaaccacagcctggatgag
gccgtgcactccatgcgcaagcagaacgtggtgcccaccgtggtggccgtgggcggcgat
gtggacatggacgtgctcaccaagatcgccctgggggacagggcagccatcttccgggag
aaggacttcgacagcctggtgcagcccggcttcttcgacaggttcatccgctggatctgt
tag
DBGET
integrated database retrieval system
