Dipodomys spectabilis (banner-tailed kangaroo rat): 122121143
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Entry
122121143 CDS
T07891
Symbol
Rnf20
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1A
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dsp04121
]
122121143 (Rnf20)
Enzymes [BR:
dsp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122121143 (Rnf20)
Ubiquitin system [BR:
dsp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
122121143 (Rnf20)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRE1B
CC_Bre1
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_5
zf-RING_2
zf-RING_UBOX
BRE1
zf-rbx1
Toxin_SdpC
Motif
Other DBs
NCBI-GeneID:
122121143
NCBI-ProteinID:
XP_042551249
LinkDB
All DBs
Position
Unknown
AA seq
975 aa
AA seq
DB search
MSGIGNKRAAGEPGTSVPPEKKTAVEDSGTTVETIKLGGVSSTEELDIRTLQTKNRKLAE
MLDQRQAIEDELREHIEKLERRQATDDASLLIVNRYWSQFDENIRIILKRYDLEQGLGDL
LTERKALVVPEPEPDSDSNQERKDDRERGEGQEPAFSFLATLASSSSEEMESQLQERVES
SRRAVSQIVNVYDKLQEKVELLSRKLNSGDNLIVEEAVQELNSFLAQENMRLQELTDLLQ
EKHRTMSQEFSKLQSKVETAESRVSVLESLIDDLQWDIDKIRKREQRLNRHLAEVLERVN
SKGYKVYGAGSSLYGGTITINARKFEEMNAELEENKELAQNRHCELEKLRQDFEEVTTQN
EKLKVELRSAVEEVVKETPEYRCMQSQFSVLYNESLQLKAHLDEARTLLHGTRGTHQRQV
ELIERDEVSLHKKLRTEVIQLEDTLAQVRKEYEMLRIEFEQTLAANEQAGPINREMRHLI
SSLQNHNHQLKGEVLRYKRKLREAQSDLNKTRLRSGSALLQSQSSTEDPKDEPTELKQDS
EDVSSQSSTLKASQEDVSEIKSKRDEEERERERREKEREREREREKEKEREREKQKLKES
EKERDSAKDKEKGKHDDIRKKEAEIIKQLKIELKKAQESQKEMKLLLDMYRSAPKEQRDK
VQLMAAEKKSKAELEDLRQRLKELEDKEKKENKKMADEDALRKIRAVEEQIEYLQKKLAM
AKQEEEALLSEMDVTGQAFEDMQEQNIRLMQQLREKDDANFKLMSERIKSNQIHKLLKEE
KEELADQVLTLKTQVDAQLQVVRKLEEKEHLLQSNIGTGEKELGLRTQALEMNKRKAMEA
AQLADDLKAQLELAQKKLHDFQDEIVENSVTKEKDMFNFKRAQEDISRLRRKLETTKKPD
NVPKCDEILMEEIKDYKARLTCPCCNMRKKDAVLTKCFHVFCFECVKTRYDTRQRKCPKC
NAAFGANDFHRIYIG
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atgtcagggattggaaataaacgagcagctggagagccaggcacatcagtgcctccagag
aagaagacagctgttgaagattcagggaccacagtggaaaccattaaactagggggcgtg
tcttcaacggaggagttagacattcgaacattgcaaaccaaaaatcgcaagctagcggaa
atgctggaccaacggcaggccattgaagatgaacttcgtgaacacatcgaaaagctggaa
cgacggcaggccaccgacgatgcctccctgttgattgttaaccggtactggagtcagttt
gatgaaaacatccgtatcatccttaaacgttacgatctggaacagggcttgggagaccta
ctcacagaaaggaaagctctggttgtgccagaaccagagcctgactctgacagcaatcag
gaacgcaaagatgaccgagagagaggggaagggcaagaaccagctttctctttccttgct
actttggccagcagttccagtgaagagatggagtctcagctgcaggagcgtgtggagtcc
tcccgccgagctgtgtcccagattgtgaatgtgtatgataagttacaagaaaaagtggag
cttttgtcccggaagctaaacagtggagataacctgatagtggaagaagcagtgcaagaa
ttgaactccttccttgcgcaagagaacatgaggctgcaggaactgacagacttgctccag
gagaagcaccgcaccatgtctcaggagttctctaagctgcaaagtaaagtggagacagct
gagtcacgagtgtctgtcctggagtcattgattgatgatctgcagtgggatattgacaaa
attcgaaagagggaacagcgactcaaccgacacttagcggaagtcctagaacgggtgaat
tctaaaggatataaggtgtatggagcggggagcagtctctatggtggcacaatcactatc
aatgcccggaagtttgaagaaatgaatgcagagcttgaggagaacaaagagttggctcag
aaccgtcactgtgagttggagaaactccggcaagactttgaggaggtcactacacagaat
gagaagttaaaggtggaattacggagtgcagtggaagaagtggttaaagaaactccagag
taccgctgcatgcaatcacagttttctgttctgtacaatgagagtcttcagttgaaagca
cacctggatgaggctcggaccctacttcatggcacacggggaacccaccagcgccaggtt
gagctcattgagcgagatgaggttagtcttcataagaagctgagaactgaagtgatccag
ctagaagatacgttggctcaggtgcgcaaagagtatgaaatgctgaggatagaatttgag
cagactcttgctgccaatgaacaagcaggtcctataaaccgggagatgcgccacctcatc
agtagcctccagaatcacaatcaccagctgaaaggggaagtcctaaggtataagcgaaaa
ctgagagaagctcagtcagacctaaacaagacacgtctgcgcagtggcagtgcccttctg
cagtctcagtctagtactgaggaccctaaggatgaacctacagagctgaaacaagactct
gaggatgtatccagccagtcatcaacactgaaggcatctcaggaagatgtcagtgaaatt
aagtccaaacgggatgaagaggagcgggagcgagaaaggcgggagaaagaaagggagaga
gaaagagaacgagagaaggaaaaggaaagagaacgagagaagcagaaactaaaagagtca
gaaaaagagagagattctgctaaggataaagagaaagggaaacatgatgatatcaggaaa
aaggaagcagaaattatcaaacaactgaagattgaactcaaaaaggcacaagagagccag
aaggagatgaaactactgctagatatgtaccgctcggcaccaaaggagcagagagacaaa
gtgcagctaatggcagcggaaaagaagtctaaggcagagttggaggatctaaggcaaaga
ctcaaggaacttgaggataaggaaaagaaagagaataagaaaatggctgatgaagatgcc
ttgaggaagatccgggctgtggaggagcagatagaatacctgcagaagaagctggccatg
gccaagcaggaggaagaagctctcctctccgagatggatgtcactggccaggcttttgaa
gacatgcaggagcaaaatattcgcctgatgcagcagttgcgggagaaggatgatgccaat
ttcaagctcatgtcagaacgcatcaaatccaatcagatccataaattgcttaaagaagag
aaggaggagcttgcagaccaggttttgactctaaagactcaggtggatgcgcagttacag
gtagtaagaaagttggaagagaaagagcacctgctgcagagcaacatcggcacaggggag
aaggagctgggtcttaggacccaagccttggagatgaacaagcgcaaggcaatggaagca
gcccagcttgctgatgatttgaaagcacaattagagttggctcagaagaagcttcatgat
tttcaggatgagattgtagagaatagtgtcaccaaagaaaaggatatgttcaatttcaaa
cgagcccaggaggacatctctagacttcgaaggaagctggaaaccacaaagaagccagac
aacgtacccaaatgtgatgagattctaatggaggagattaaggattacaaggcccgtctg
acctgcccttgctgcaatatgcgtaaaaaggatgctgtacttaccaagtgttttcatgtt
ttctgctttgagtgtgtgaagacgcgctatgacactcgccagcgcaaatgtcccaagtgt
aatgcagcttttggtgccaatgatttccatcgcatctacattggttga
DBGET
integrated database retrieval system
