Dipodomys spectabilis (banner-tailed kangaroo rat): 122121343
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Entry
122121343 CDS
T07891
Symbol
Tgfbrap1
Name
(RefSeq) transforming growth factor-beta receptor-associated protein 1
KO
K20177
vacuolar protein sorting-associated protein 3
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
122121343 (Tgfbrap1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dsp04131
]
122121343 (Tgfbrap1)
Membrane trafficking [BR:
dsp04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
122121343 (Tgfbrap1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps39_1
zf-Vps39_C
CNH
Clathrin
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
122121343
NCBI-ProteinID:
XP_042551451
LinkDB
All DBs
Position
Unknown
AA seq
860 aa
AA seq
DB search
MMSIKAFTLVSAVEQELLAGDKERIHIECVECCGRNLYIGTADCFIYHFLLEEKTLPTGT
SSFTATKQLHRHLGFKKPVNELRAASALNRLLVLCDNSITLVNMLNLEPVPSGARIKGAV
TFALNENPVSGDPFCVEVCIISVKRRTIQMFLVYEDRVQIVKEVSTPEQPLAVAVDGYFL
CLALTTQYIILNYSTGLSQDLFPYCSEEKPPIVKRIGRQEFLLAGPGGLGMFATVAGISQ
RAPVHWSENVVGAAICFPYVIALDAEFITVHSMLDQQQKQTLPFKEGHILQDFEGRVIVA
TSKGVYILVPLPLEKQIQDLLASHRVEEALVLAKGARRNIPKEKFQVMYRRILQQAGFIQ
FAQLQFLEAKELFRSGQLDVRELISLYPFLLPTSSSFTRSHPPLHEYADLNQLTQGDQEK
MAKCKRFLMSYLNEVRSTEVANGYKEDIDTALLKLYAEADHDSLLDLLVTENFCLLTDSA
AWLEKHKKYFALGLLYHYNNQDAAAVQLWVNIVDGDVQDSTRSDLYEYIVDFLTFCLDRE
LVWTYADWVLQKSEEIGVQVFTKRPLDDQQKTSFNPDDIISCLKKYPKALVKYLEHLVID
RNLQKEEYHTHLAVLYLEEVLQQKMSGSDKGGEATETQRKLRHLLQKSDLYRVHFLIEKI
QGAGLPMERAILHGKLREHEKALHILVHELGDFSAAEDYCLWGSEGQDAPSRQRLFHMLL
AMYLHAGPSAHELAMPAVDLLNRHAREFDATQVLQLLPGTWSVQLLCPFLMGAVRDSIHT
RRTTQVALGLARSENLIYTYDKMKLKGSAIKLSDKKLCQLCQNPFGEPVFVRYPNGGLVH
THCAASRHATPSSPSPGTRT
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atgatgagcatcaaggccttcactttggtctctgctgtggagcaggagctgctggcaggc
gacaaggaacgcatccacatcgagtgcgtggaatgctgcggcaggaacctctacatcggc
accgctgactgcttcatttaccacttcctgctggaggagaagacactgcccaccggcaca
tcctcattcactgccaccaaacagttgcacaggcacctgggcttcaagaagcccgtgaat
gagctgcgagcagcctcagcccttaacaggctgctggtgctgtgcgacaactccataacc
ctggtcaatatgctgaacctggagcctgtcccctccggggctcgcatcaaaggagcggtg
acatttgctctgaatgagaaccctgtgagtggggacccattctgtgtggaagtgtgcatc
atctcagtgaaacgtaggaccatccagatgtttctggtgtacgaggaccgcgttcagatc
gtcaaggaagtgtccaccccagagcagcccctggctgtggctgtagatggctactttctg
tgcctggccctgaccacacagtacatcatcctgaactatagcacgggcctctcccaggac
ctgtttccctactgcagtgaggagaagccacctattgtcaagaggataggcagacaggag
ttcctgctggctggccccggaggcctgggcatgtttgcaacggtggctgggatctctcag
cgggcccccgtgcactggtcggagaatgtggtaggggcagccatctgcttcccatatgtc
attgcgcttgatgctgagttcatcacagtccatagcatgttggatcaacagcaaaaacag
accctgccctttaaggagggccatatcctgcaggactttgaaggaagagtgattgttgcc
acaagtaaaggagtttatatcttggtcccattgcctctggaaaaacaaatacaggatctg
ctagcaagccacagagtggaggaggctttggttttagcgaaaggagcccggaggaacatt
ccaaaagaaaaatttcaggtaatgtacagaaggatcctacagcaggcgggctttatacag
tttgcacagcttcagttcctggaagctaaagagctcttcagaagcggccagcttgatgtc
cgggagctgatctctctctaccccttcctgttgcccacctcctcttcattcacccggtct
caccctcctcttcatgagtacgcagacctgaaccagctcacccaaggcgaccaggagaag
atggccaagtgcaagcgttttctcatgagctacctgaatgaggtccgcagcacagaggtg
gccaatggctacaaagaagacatcgacacagccttgctcaagctctatgcagaggcagac
cacgacagcctgctggacctcctggtcactgaaaacttctgcctcctcaccgacagtgct
gcctggctggaaaagcacaaaaagtactttgcacttggactactctatcattacaataac
caagatgctgctgcagttcagttgtgggtgaacatcgtggatggggatgtccaggactcc
acacgctcagatctgtatgaatatattgtagattttttaaccttctgcttagaccgagag
ctggtatggacctatgcagactgggtcttgcagaaaagtgaggagattggagttcaagtc
ttcaccaagagacctttagatgaccagcagaagaccagttttaatccagatgatattatc
agttgccttaaaaaataccctaaagctctggttaaatatctggaacacctcgttatcgac
aggaatctacagaaagaagagtaccacactcacctggctgtcctctacctggaagaggtg
cttcagcaaaagatgtctggcagcgacaagggcggcgaagccaccgagacacagagaaag
ctacggcacctgctgcagaaatctgacttgtaccgagtccactttctcatagagaagatc
cagggtgctgggctgcccatggagcgcgccatcctccacgggaagctgcgcgagcacgag
aaggccctgcatatcctggttcacgagctgggggacttctccgcagccgaagactactgc
ctgtggggctccgagggccaggacgcacccagccgccagcgcctcttccacatgctgctc
gccatgtacctccacgccggcccctctgcccatgagctggccatgccagccgtggacctg
ctcaaccgtcatgccagggaatttgacgctacccaagtgctgcagctgctgccaggcacc
tggtcagtgcagctgctctgcccattcctgatgggggctgtgagagacagtatccatacc
aggaggaccacacaggtagcccttggcctggcaaggtcggaaaacttgatctacacatat
gacaagatgaagttgaagggaagtgcaatcaagctctcagacaaaaagctctgccagctc
tgccagaacccctttggtgaacctgtgtttgtcagatacccaaatggagggcttgtgcac
acccactgtgctgccagcagacacgccacccccagctcccccagccctggcacccggact
tga
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