Dipodomys spectabilis (banner-tailed kangaroo rat): 122121555
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Entry
122121555 CDS
T07891
Symbol
Hdac9
Name
(RefSeq) histone deacetylase 9
KO
K11409
histone deacetylase 9 [EC:
3.5.1.98
]
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp04613
Neutrophil extracellular trap formation
dsp05034
Alcoholism
dsp05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
122121555 (Hdac9)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
122121555 (Hdac9)
09165 Substance dependence
05034 Alcoholism
122121555 (Hdac9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dsp03036
]
122121555 (Hdac9)
Enzymes [BR:
dsp01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
122121555 (Hdac9)
Chromosome and associated proteins [BR:
dsp03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
122121555 (Hdac9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
PNRC
Motif
Other DBs
NCBI-GeneID:
122121555
NCBI-ProteinID:
XP_042551733
LinkDB
All DBs
Position
Unknown
AA seq
1089 aa
AA seq
DB search
MSSPVQPDGVAAREQLLAQQRMHSRISSVDVKSEVPVGLEPISPLDLRTDLRMMMPVVDP
VVREKQLQQELLLIQQQQQIQKQLLIAEFQKQHENLTRQHQAQLQEHIKLQQELLAIKQQ
QELLEKEQKLEQQRQEQEVERHRREQQLPPLRGKDRGRERAVASTEVKQKLQEFLLSKSA
TKDTPTNGKNHSVSRHPKLWYTAAHHTSLDQSSPPLSGTSPSYKYTLPGAQDAKDDFPLR
KTASEPNLKVRSRLKQKVAERRSSPLLRRKDGNVTSFKKRMFEVTESSVSSSSPGSGPSS
PNNGPTGNVTENETSVLPPTPHAEQLVSQQRILIHEDSMNLLSLYTSPSLPNITLGLPAV
PSPLSASNSLKEKQKCETQTLRQGVPLPGQYGGSIPASSSHAHVALEGKPNSSHQALLQH
LLLKEQMRQQKLLVTGGVPLHPQSPLATKERISPGIRGSHKLPRHRPLNRTQSAPLPQST
LAQLVIQQQHQQFLEKQKQYQQQIHMNKLLSKSIEQLKQPGSHLEEAEEELQVDQAMQED
RAPSSDTSTRSDSSTCVDDTLGQVGAVKVKEEPVDRDEDTQIQEMESGEQAAFMQQQPFP
EARHTRALSGRPAQLAVVGMDGLEKHRLLSRTQSSPAASMLPLPAVDHPLQPGSATGIAY
DPLMLKHQCICGSSTTHPEHAGRIQSIWSRLQETGLLNKCERIQGRKASLEEIQLIHSEH
HSLLYGTSPLDGQKLDPRILLGDDSQKYFSSLPCGGLGVDSDTIWNELHSSGAARMAVGC
VIELASKVASGELKNGFAVVRPPGHHAEESAAMGFCFFNSVAITAKYLRDQLNISKILIV
DLDVHHGNGTQQAFYADPSILYISLHRYDEGNFFPGSGAPNEVGTGLGEGYNINIAWTGG
LDPPMGDVEYLEAFRTVVMPVAKEFDPDVVLVSAGFDALEGHTSPLGGYKVTAKCFGHLT
KQLMTLADGRVALALEGGHDLTAICDASEACVNALLGNELEPLAEDTLHQSPNMNAVASL
QKIIEIQSKYWKSVRMVAVPRGCALPGTQLQEETETVSALASLTVDVEQPFAQEDSRAAC
EPMEEEPAS
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atgagctcaccagtgcagccagatggggtggctgcgcgggagcaactcctggctcagcaa
agaatgcacagtaggatcagctcagtggatgtgaagtcagaggtccctgtgggcctggag
cccatctcacctttagacctaaggacggacctcaggatgatgatgccagtggtggaccct
gttgtccgggagaaacaactgcagcaggaattacttcttattcagcaacagcagcaaatc
cagaagcagcttctgatcgcagagttccagaaacagcatgagaacttgacacgacagcat
caggctcagcttcaggagcacataaagttgcaacaggaacttctagccataaaacagcag
caagaactcctagaaaaggagcagaaactggagcagcagaggcaagaacaggaagtagag
aggcatcgcagagaacagcagcttcctcctctcagaggcaaagatagaggacgagaaaga
gctgtggcaagcacagaagtaaagcagaagcttcaagaattcctgttgagtaaatcagca
acaaaagacactccaactaatggaaaaaatcattccgtgagccgccatcccaagctctgg
tacacggctgcccaccacacatctttggatcaaagctcaccaccccttagtgggacctct
ccatcctacaaatacaccttgccaggagcacaagatgccaaggatgatttcccactccga
aaaactgcctctgagcccaacttgaaggtgcggtccaggttaaaacagaaagtggcagag
aggagaagcagtcccttactcaggcggaaggatggaaatgtcacttcattcaagaagcga
atgtttgaggtgacagaatcctcagtcagtagcagttctcctgggtctggtcccagttca
ccaaacaatgggccaactggaaatgttactgaaaatgaaacttcagttttgccccctact
cctcatgctgagcaactggtttcacagcagcgcatcttaatccacgaagattccatgaac
ctgctaagtctctatacctctccttctttgcccaacatcaccttggggctgccggcagtg
ccctcgccactcagtgcttcaaattcacttaaagaaaagcaaaagtgtgagacacagacg
ctcaggcaaggtgttcctcttcctggccagtacgggggcagcatcccagcctcatcaagc
catgctcatgtcgccctagaggggaagcccaacagcagccaccaagctctcctgcaacat
ttattactgaaagaacaaatgcgacaacaaaagcttcttgtgactggtggagtcccctta
catcctcagtctccattggcgacaaaagagagaatttcacctggcattcgaggttcccac
aaattgccccgtcacagacctctgaatagaacccagtctgcacctttgcctcagagtaca
ttggctcagctggtcattcagcagcaacaccagcagttcttggagaagcagaaacaatac
cagcagcagatccacatgaacaaactgctctcgaaatctattgaacaactgaagcaacca
ggcagtcaccttgaggaggcagaggaagagcttcaggtcgaccaggcgatgcaggaagac
agagcgccctctagtgacaccagcactaggagcgacagcagtacttgtgtggatgataca
ctgggacaagttggggcggtgaaagtcaaggaggaacccgtggacagagatgaagatact
cagatccaggaaatggaatctggggagcaggctgcttttatgcaacagcagcccttcccg
gaggcccggcacacacgtgcgctctcagggcgcccggctcagctggctgtggttggcatg
gatggattagagaagcatcggctcctctccaggactcagtcttcccctgctgcctccatg
ttacctctcccagcagtggaccaccccctccagcctggctcagcaactggaattgcctat
gatcccctgatgctgaagcaccagtgcatttgtggcagttccaccacccacccagagcac
gctggaagaatacagagcatctggtcacggctacaagaaactgggctgctaaataaatgt
gagcgaattcaaggtcgaaaagccagcctggaggaaatacagcttattcattctgaacat
cactcactgttatatggcaccagccccctggatggacagaagctggaccccaggatactt
ctaggtgatgattctcaaaagtatttttcctcattaccttgtggtggactgggggtggac
agtgacaccatttggaatgagctgcactcgtccggtgctgcacgcatggctgttggctgt
gtcatcgagctggcttccaaagtggcctcaggagagctgaagaatgggtttgctgttgtg
aggcccccaggccatcatgctgaagaatctgcagccatggggttctgcttttttaattca
gttgcaattacagccaagtacttgagagaccaactaaatataagcaagatattgattgta
gatctggatgtgcaccatggaaacggtacacagcaggccttttatgctgaccccagcatc
ctgtacatttcactccatcgctatgatgaagggaactttttccctggcagtggagcccca
aatgaggttggaacaggccttggagaagggtataatataaatattgcctggacaggtggc
cttgatcctcccatgggagatgtggagtaccttgaagcattcaggactgtcgtaatgcct
gtggccaaagagtttgatccagatgtggtcctggtttccgctggatttgatgcattggaa
ggccacacctctccactgggggggtacaaagtgactgcaaaatgctttggtcacttgacg
aagcaattgatgacattggccgatgggcgtgtggcgctggctctggaaggaggacacgac
ctcacagccatctgtgatgcatcagaagcctgcgtaaatgcccttctaggaaatgagcta
gagccgcttgctgaggacactctccatcaatccccaaacatgaatgctgtcgcttcttta
cagaagatcattgaaattcaaagcaagtactggaagtcagtaaggatggtggctgtgcca
aggggctgtgctctgcctggtactcagttgcaagaggagacagagaccgtttctgctctg
gcctccctcacggtggatgtggaacaaccctttgctcaggaagacagcagagctgcttgt
gagcccatggaagaggagccggcctcatga
DBGET
integrated database retrieval system
