Dipodomys spectabilis (banner-tailed kangaroo rat): 122121864
Help
Entry
122121864 CDS
T07891
Symbol
Ncbp1
Name
(RefSeq) nuclear cap-binding protein subunit 1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp03013
Nucleocytoplasmic transport
dsp03015
mRNA surveillance pathway
dsp03040
Spliceosome
dsp05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122121864 (Ncbp1)
09122 Translation
03013 Nucleocytoplasmic transport
122121864 (Ncbp1)
03015 mRNA surveillance pathway
122121864 (Ncbp1)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
122121864 (Ncbp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dsp03019
]
122121864 (Ncbp1)
03041 Spliceosome [BR:
dsp03041
]
122121864 (Ncbp1)
Messenger RNA biogenesis [BR:
dsp03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
122121864 (Ncbp1)
Spliceosome [BR:
dsp03041
]
Common components
Common spliceosomal components
Cap binding complex
122121864 (Ncbp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G
MIF4G_like
DUF1690
Cob_adeno_trans
DUF2524
Motif
Other DBs
NCBI-GeneID:
122121864
NCBI-ProteinID:
XP_042552001
LinkDB
All DBs
Position
Unknown
AA seq
790 aa
AA seq
DB search
MSRRRHSDENDGGQPHKRRKTSDANKTEDHLESLICKVGEKSACSLESNLEGLAGVLEAD
LPNYKSKILRLLCTVARLLPEKLTIYTTLVGLLNARNYNLGGEFVEAMIRQLKESLKANN
YNEAVYLVRFLSDLVNCHVIAAPSMVAMFENFVSVTQEEDVPQVRRDWYVYAFLSSLPWV
GKELYEKKDAEMDRIFANTESYLKRRQKTHVPMLQVWTADKPHPQEEYLDCLWAQIQKLK
KDRWQERHILRPYLAFDSILCEALQHNLPPFTPPPHTEDSVYPMPRVIFRMFDYTDDPEG
PVMPGSHSVERFVIEENLHCIIKSHWKERQTCAAKLLSYPGKSKIPLNYHIVEVIFAELF
QLPAPPHIDVMYTTLLIELCKLQPGSLPQVLAQATEMLYMRLDTMSTTCVDRFINWFSHH
LSNFQFRWSWEDWSDCLTQDLESPKPKFVREVLEKCMRLSYHQRILDIVPPTFSALCPAN
PTCIYKYGDESSNSLPGHSVALCLSVAFKSKATNDEIFSILKDVPNPNQDDDDDEGFSFN
PLKIEVFVQTLLHLASKSFSHSFSALAKFHEVFKTLAESDEGKLHVLRIMFEVWRNHPQM
IAVLVDKMIRTQIVDCAAVANWIFSSELSRDFTRLFVWEILHSTIRKMNKHVLKIQKELE
EAKEKLARQHKRRSDDDDRSSDRKDGALEEQIERLQEKVESAQSEQKNLFLVIFQRFIMI
LTEHLVRCETDGTSILTPWYKNCIERLQQIFLQHHQIIQQYMVTLENLLFTAELDPHILA
VFQQFCALQA
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaggcggcggcacagcgacgagaacgatggtggacagcctcacaaaaggagaaag
acttctgatgcaaataaaactgaagatcatttggaatctttaatatgcaaagtaggagaa
aagagtgcctgctctttggagagcaacctagaaggtttggctggtgtcttagaagctgat
cttcctaactacaagagcaagattttaaggcttctttgtacagttgcacgcctactacct
gagaagctgacaatttatacaactttagttggactgctgaatgctaggaattacaacctt
ggtggagaatttgtagaagcaatgattcgtcaacttaaagagtcgttgaaagcaaacaat
tacaatgaagctgtctatttggttcgttttttatctgatcttgtgaattgtcatgtgatc
gctgccccatcaatggttgctatgtttgagaattttgtaagtgtaactcaggaagaagat
gttcctcaggtacgacgagattggtatgtgtatgcatttctgtcatctttgccctgggtt
ggaaaagagttgtatgaaaagaaagatgcagagatggaccgcatctttgccaacactgaa
agctatctaaaaaggcgccagaagacacatgtgcccatgttgcaagtatggactgctgat
aagccacacccacaagaagagtatttagattgcctgtgggcccagattcagaaattgaaa
aaggatcgctggcaggaacggcacatcctaagaccttatcttgcctttgacagcatcctc
tgtgaagcactacagcataatctgcctcctttcacaccgcctcctcacactgaagattca
gtgtaccccatgcccagggtcatcttcagaatgtttgattacacagatgatcctgagggt
cctgttatgccaggaagtcattcagtggaaaggtttgttatagaagagaatctccactgc
atcattaagtcccactggaaggaaaggcagacttgtgctgcaaagctcctgagctaccca
ggaaagagtaagatccccttgaactaccacatagtggaggtgatcttcgcagagctgttc
cagctcccagcgccccctcacatcgatgtgatgtacactacactgctcattgagctgtgc
aaactgcagcctggctctctccctcaagttcttgcacaagcaactgaaatgttatacatg
cgtctggacacaatgagtaccacttgtgtggacagatttattaattggttttctcatcat
ctaagtaattttcagttccgttggagctgggaagattggtcagattgtcttactcaagat
cttgagagtcccaaaccaaagtttgtacgagaagttctagaaaaatgtatgaggttgtct
taccatcagcgtatattagatattgttcctcctaccttctcagctctatgtcctgcaaac
ccaacctgcatttacaagtatggagatgaaagtagcaattctcttcctggacattctgtg
gccctctgtttatctgttgcctttaaaagtaaggcaaccaatgatgaaatcttcagcatt
ctgaaagatgtaccaaatcccaaccaggatgacgatgatgatgaagggttcagttttaac
ccattgaaaatagaggtctttgtacagactctgcttcatttggcatccaaatcattcagc
cactccttcagtgctcttgcaaagtttcatgaagtcttcaaaaccctagcggagagtgat
gaggggaagctacatgtgttgagaattatgttcgaggtttggaggaaccatccacagatg
attgccgtgctagttgataagatgattcgcacacagattgttgactgtgctgcagtagca
aattggatcttctcttcagagctgtctcgtgactttacaagattgtttgtttgggaaatc
ttgcactctacaattcgcaagatgaacaaacacgttctgaagatccagaaagagttagaa
gaagctaaagagaaactggcaaggcaacataaacggcgaagtgatgatgacgatagaagc
agtgacaggaaggatggggcccttgaggagcaaatagaaagactacaggaaaaagtagaa
tcagcacagagtgagcagaagaacctcttccttgtcatatttcagcgttttatcatgatc
ttgactgagcacttggtacgatgtgaaactgatgggaccagtatattaactccgtggtat
aagaactgtatagagagactccagcagatcttcctacagcatcaccaaataatccagcag
tacatggtgaccctggagaacctgctcttcaccgcagagttagaccctcacatcctggct
gtgttccagcagttctgtgctcttcaggcctaa
DBGET
integrated database retrieval system
