Dipodomys spectabilis (banner-tailed kangaroo rat): 122121944
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Entry
122121944 CDS
T07891
Symbol
Exosc3
Name
(RefSeq) exosome complex component RRP40
KO
K03681
exosome complex component RRP40
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122121944 (Exosc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dsp03019
]
122121944 (Exosc3)
Messenger RNA biogenesis [BR:
dsp03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
122121944 (Exosc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRP40_S1
RRP40_N_mamm
KH_6
S1_RRP4
Rrp40_N
Motif
Other DBs
NCBI-GeneID:
122121944
NCBI-ProteinID:
XP_042552084
LinkDB
All DBs
Position
Unknown
AA seq
272 aa
AA seq
DB search
MAGVVSTASPADRGVRAARAVLGQVVLPGEELLLPEQEDPEGPGGTGERPLRLNTGARSR
VRVVCGPGLRRCGDRLLVTKCGRLRHKEPGGGGGGVYWVDSQQKRYVPVKGDHVIGIVTA
KSGDIFKVDVGGSEPASLSYLAFEGATKRNRPNVQVGDLIYGQFVVANKDMEPEMVCIDS
CGRANGMGVIGQDGLLFKVTLGLIRKLLAPDCEIIQEVGKLYPLEIVFGMNGRIWVKAKT
IQQTLILANILEACEHMTSEQRKQIFARLAES
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atggctggagtggtgtctacggcgtctcccgcggaccgcggcgtgcgggcggcgcgtgcc
gtgttagggcaggtggttctccccggcgaggagctgctgctgccggaacaggaggaccca
gaagggcccggcggtactggggagcgacccttgcgcctcaacactggggcgcgctctcga
gtgcgggtagtttgcggcccgggcctgcggcgctgcggggaccgcttgctggtcactaaa
tgtgggcgcctccgtcacaaggagcccggtggcggcggcggcggcgtctactgggtggat
tcgcaacagaagcggtatgtgccagtgaaaggggaccatgtgattggcatagtgacagcg
aaatctggagatatattcaaagttgatgttggagggagtgagccagcttccttgtcttac
ttggcatttgaaggtgcaactaaaagaaacagaccaaatgtgcaggttggagatctcatc
tatggccaatttgtggttgctaataaagatatggaaccagagatggtctgtattgacagc
tgtggacgggccaatggaatgggtgtgattggacaggatggtctcctttttaaagtgact
ctgggcttaattagaaagctattagctccagactgtgaaatcatacaggaagtgggaaaa
ctctatcctctggagattgtatttggaatgaatggaagaatatgggttaaagcaaaaacc
atccaacagactttaattttggcaaacattttagaagcatgtgaacatatgacatcagag
caaagaaaacaaatctttgccaggttggcagaaagttga
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