Dipodomys spectabilis (banner-tailed kangaroo rat): 122122256
Help
Entry
122122256 CDS
T07891
Symbol
Ddx21
Name
(RefSeq) nucleolar RNA helicase 2
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dsp03009
]
122122256 (Ddx21)
03036 Chromosome and associated proteins [BR:
dsp03036
]
122122256 (Ddx21)
Enzymes [BR:
dsp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122122256 (Ddx21)
Ribosome biogenesis [BR:
dsp03009
]
Eukaryotic type
Pre-60S particles
Helicases
122122256 (Ddx21)
Chromosome and associated proteins [BR:
dsp03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
122122256 (Ddx21)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
ResIII
CMS1
Cas3-like_C_2
AAA_30
Motif
Other DBs
NCBI-GeneID:
122122256
NCBI-ProteinID:
XP_042552270
LinkDB
All DBs
Position
Unknown
AA seq
783 aa
AA seq
DB search
MPGKLRSDAELESDTAVEKMEPLRKQNEKKIRKEKPKLKKTEESSEIQEEAVSPKTKKKK
TRSSEVDMSSPKSKKAKKQEESSQDDSISSKTQNAKKKKELIDKKVVSPKTKKVQKSEVA
SEAPKPKKMKKEKEVNGEIGEKSPKLKNGLSHSEPDSHSSEAASEENSETEQEIPVEQKE
GAFSNFPISEETIKHLKARGVTFLFPIQAKTFHHVYSGKDLIAQARTGTGKTFSFAIPLI
EKLQGGLQDRKRGRAPQVLVLAPTRELASQVSRDFSDITKKLSVACFYGGTPYGGQIERM
RNGIDILVGTPGRIKDHLQNGKLDLTKLKHVVLDEVDQMLDMGFADQVEEILCVAYKKDS
EDNPQTLLFSATCPHWVFNVAKKYMKSTYEQVDLIGKKTQKTAVTVEHLAIKCHWTERAA
VIGDVIRVYSGHQGRTIIFCETKKEAQELSQSSAMKQEAQSLHGDIPQKQREITLKGFRN
GDFGVLVATNVAARGLDIPEVDLVVQSSPPKDVESYIHRSGRTGRAGRTGVCICFYQHKE
EYQLVQVEQKAGIKFKRIGVPSATEIIKASSKDAIRLLDTVPPTAISHFKQSAEKLIEEK
GAVEALAAALAHISGATSVDQRSLINSQAGFVTMILQCSIEMPNISYAWKELKEQLGESI
DSKIKGMVFLKGKLGVCFDVRTAAVTEIQEKWHDSRRWQLSVATEQPELEGPPEGFRGGR
GQRDGSRGGRGQRDGSRGFRGQRNGTRNFRGQRGGNRSFRGQQSGGNQSNRGQKRSFSKA
FGQ
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgccgggaaaactccgcagcgacgccgaattggaatcagacacggctgtggaaaagatg
gagccactgcggaagcaaaatgagaagaaaattagaaaagaaaagccaaaactcaagaag
actgaagagtcatcagaaattcaggaagaagctgtatcccctaaaactaaaaaaaagaaa
actaggtcttctgaagttgatatgagttctcctaaatccaaaaaggcaaaaaagcaagag
gagtcatctcaggatgatagtatttcttctaaaactcagaatgctaaaaagaaaaaggaa
ctcattgacaagaaagttgtctcccctaaaactaagaaagtgcaaaaaagtgaggtggct
tctgaagctcctaagcccaagaaaatgaagaaagaaaaagaagtgaatggagaaattgga
gagaaaagtcccaaattgaagaatggactctctcattctgaacctgactctcactccagt
gaagctgccagtgaagaaaacagtgagacagagcaggaaatacccgtggaacaaaaagaa
ggagctttctctaattttcccatatctgaagagactatcaagcatctcaaagcccgtggg
gtgaccttcctatttcctatacaagcaaagacatttcaccatgtctatagtggaaaagac
ttaattgcacaggcacggacaggaactgggaagacattctcctttgccatccctttgatt
gagaaactacagggtggtctgcaagacaggaagagaggccgagctcctcaggtacttgtt
cttgcacctacaagagagctggcaagtcaagtcagcagagacttcagtgacatcacaaaa
aagctatctgtggcttgcttttatggtggaactccctatggaggtcaaattgagcggatg
cggaatgggattgatatcctggttgggaccccaggtcgaatcaaagaccacctacagaac
ggcaaactcgatctcaccaagcttaagcatgttgtgctggatgaagttgaccagatgttg
gatatgggttttgcagatcaagtagaagagatcttatgtgtggcctacaaaaaagattct
gaagacaatccccaaacattgcttttttctgcaacttgccctcattgggtatttaatgtt
gctaagaaatacatgaaatctacatatgaacaggtggacctgattggtaaaaagactcag
aaaacagcagtaactgtggagcatttagctatcaagtgtcactggactgagagggcagca
gttattggggatgtgatccgagtgtacagtggtcatcaggggcgcacgatcatcttctgt
gaaaccaagaaagaagcccaagaactatcacagagttcagcaatgaagcaggaagcgcag
tcattacatggagacattccacagaagcaaagggaaatcaccttgaaaggttttagaaat
ggtgattttggagttttggtggcaaccaatgtcgctgcacgtggtttagacattcctgaa
gttgatttggttgtacagagttctccaccaaaggatgtggaatcctacattcatcgttct
gggcgcacaggtcgagctggaaggacaggggtgtgcatctgcttctatcagcacaaggaa
gaataccagttagtacaagtggaacaaaaagcgggaattaaatttaaacgaataggtgtt
ccttctgcaacagaaataataaaagcttccagcaaagatgccatcaggcttttagatact
gtgcctcctactgccattagccacttcaagcagtcagctgagaagctcatagaggagaag
ggagccgtggaggccctggccgcagccctggcccatatttcaggtgccacatcagtggat
cagcgctccttaatcaactcacaggcaggttttgtgaccatgatcctgcagtgctcaatt
gaaatgccaaacattagttatgcttggaaagaacttaaggagcagctaggcgagagcatc
gattccaaaataaagggaatggtcttcctcaagggaaagctgggtgtttgttttgatgta
cgtactgcagctgtcacagaaatacaggagaaatggcatgactcacgacgttggcagctc
tctgtggccacagagcaaccagagctggaagggccaccagaaggattccgaggcggcagg
ggacagcgagatggcagccgaggtggcaggggacagcgagatggcagccgaggtttcagg
ggacagcggaacggaaccagaaacttcaggggacagcggggcggaaatagaagtttcagg
ggacagcagtcaggtggcaaccaaagtaatagagggcagaagcggagtttcagtaaagca
tttggtcagtga
DBGET
integrated database retrieval system
