Dipodomys spectabilis (banner-tailed kangaroo rat): 122122513
Help
Entry
122122513 CDS
T07891
Symbol
Trim54
Name
(RefSeq) tripartite motif-containing protein 54
KO
K10653
tripartite motif-containing protein 54
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
122122513 (Trim54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dsp04121
]
122122513 (Trim54)
Ubiquitin system [BR:
dsp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
122122513 (Trim54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
RING_XB3-XBAT31
zf-B_box
zf-RING_5
zf-RING_2
zf-C3HC4_4
zf-C3HC4_3
zf-RING_6
TRIM_CC
DUF349
Sina_RING
PHP
CoiA_N
DD_DDX21-DDX50
COG2_C
FlgN
DUF5799
DUF1421
Zn_ribbon_FGT1_2
UvrD_C
SpoIISA_toxin
GH123_cat
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
122122513
NCBI-ProteinID:
XP_042552685
LinkDB
All DBs
Position
Unknown
AA seq
364 aa
AA seq
DB search
MNFAVGFKPLLGDAHSMDNLEKQLICPICLEMFSKPVVILPCQHNLCRKCANDVFQASNP
LWQSRGSTAVSSGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPLHSKA
EQHLMCEEHEDEKINIYCLSCEVPTCSLCKVFGAHKDCEVAPLPTIYKRQKSELSDGIAM
LVAGNDRVQAVITQMEEVCQTIEDNSRRQKQLLNQRFETLCAVLEERKGELLQALAREQE
EKLQRVRGLIRQYGDHLEASSKLVESAIQSMEEPQMALYLQQAKELINKVGAMSKVELAG
RPEPGYESMEQFSVSVEHVAEMLRTIDFRPGAAGEDEDEEVAFDGDDGNAGPEEERPSAS
ESLH
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcgccgtgggtttcaagccgctgctcggggatgcgcacagcatggacaacctg
gagaagcagctcatctgccccatctgcctggagatgttctccaagcccgtggtgatcctg
ccctgccagcacaacctgtgccgcaagtgcgcaaacgacgtcttccaggcctcgaaccct
ctgtggcaatcccggggctccacggctgtgtcatcaggaggccgtttccgctgcccatct
tgcaggcatgaggttgtcctggatcgacatggagtctatggcctgcagcgaaacctgcta
gtggagaacattattgatatttacaagcaggaatcctccaggccactgcactccaaagcg
gagcagcatctcatgtgtgaggaacatgaggatgaaaagatcaacatctactgcctgagc
tgtgaagtgcccacctgctctctctgcaaggtctttggggcccacaaggactgtgaagtg
gcaccactgcccaccatttacaaacgccagaagagcgagctcagcgatggcatcgcgatg
ctggtggcgggcaatgaccgggtgcaagcagtgatcacgcagatggaggaggtgtgccag
accatcgaggacaacagccgcaggcagaagcagttgttaaaccagaggttcgagaccctg
tgcgccgtgctggaggagcgcaagggcgagctgctgcaggcgctggcccgggagcaggag
gagaagctgcagcgtgtccgcggcctcatccgccagtatggagaccacctggaggcctcc
tccaagctggtggagtcggccatccagtccatggaggagccccaaatggcgctctacctc
cagcaggccaaggaactgatcaataaggtcggggccatgtcgaaggtggagctggcgggg
cggcccgagccgggctacgagagcatggagcagttctcggtgagcgtggagcacgtggcc
gaaatgctgcggaccattgacttccggcccggagcagccggggaggacgaggatgaggag
gtggcgttcgacggggacgacggtaacgcgggccccgaggaagagcggccgagcgcatca
gaaagcctgcactga
DBGET
integrated database retrieval system
