Dipodomys spectabilis (banner-tailed kangaroo rat): 122122758
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Entry
122122758 CDS
T07891
Symbol
Col4a2
Name
(RefSeq) collagen alpha-2(IV) chain
KO
K06237
collagen type IV alpha
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp04151
PI3K-Akt signaling pathway
dsp04382
Cornified envelope formation
dsp04510
Focal adhesion
dsp04512
ECM-receptor interaction
dsp04820
Cytoskeleton in muscle cells
dsp04926
Relaxin signaling pathway
dsp04933
AGE-RAGE signaling pathway in diabetic complications
dsp04974
Protein digestion and absorption
dsp05146
Amoebiasis
dsp05165
Human papillomavirus infection
dsp05200
Pathways in cancer
dsp05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
122122758 (Col4a2)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
122122758 (Col4a2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
122122758 (Col4a2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
122122758 (Col4a2)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
122122758 (Col4a2)
09154 Digestive system
04974 Protein digestion and absorption
122122758 (Col4a2)
09158 Development and regeneration
04382 Cornified envelope formation
122122758 (Col4a2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
122122758 (Col4a2)
09162 Cancer: specific types
05222 Small cell lung cancer
122122758 (Col4a2)
09172 Infectious disease: viral
05165 Human papillomavirus infection
122122758 (Col4a2)
09174 Infectious disease: parasitic
05146 Amoebiasis
122122758 (Col4a2)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
122122758 (Col4a2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dsp04147
]
122122758 (Col4a2)
00536 Glycosaminoglycan binding proteins [BR:
dsp00536
]
122122758 (Col4a2)
Exosome [BR:
dsp04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
122122758 (Col4a2)
Glycosaminoglycan binding proteins [BR:
dsp00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
122122758 (Col4a2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
122122758
NCBI-ProteinID:
XP_042553049
LinkDB
All DBs
Position
Unknown
AA seq
1707 aa
AA seq
DB search
MGRGPTAAPGAALRRWLLLGAATLCLARGVLAGVKKFDVPCGGRDCSGGCQCYPEKGGRG
QPGPVGPQGFSGPPGLQGFPGLQGRKGDKGERGAPGTTGPKGEVGARGVSGFPGADGIPG
HPGQGGPRGRPGYDGCNGTRGDAGPQGPSGSGGFPGSPGPQGPKGQKGEPYALSEEDRGK
YRGETGEPGLVGFQGPPGRPGPVGPIGPVGAPGRPGPPGPPGPKGQPGNRGLGFYGEKGE
KGDIGQPGPNGIPSDTTLIGPTTTTYRPDQYKGQKGSEGEPGIPGVSLKGEEGVMGFPGA
RGFPGLDGERGAQGQKGSKGLDGFQGPGGPRGPKGEQGERGPPGPPAYSPHPSLAKGDRG
DPGFPGAHGEPGFRGEPGDPGTVGPPGPTIGVGDERRGLVGEMGPKGFPGDPGLPARYPG
LPGADGKPGLPGAPGPAGPPGPDGFLFGLKGAGGRVGYPGPSGFPGTRGQKGWKGDSGDC
KCADDFPGGLPGRPGPKGFPGINGEPGRKGQQGDPGQHGIPGFPGFKGAPGLAGIPGPKG
IKGDSRTVTTKGERGQPGVPGVHGMKGDDGVPGRDGLDGFPGLPGPPGDGIKGPPGDSGY
SGIPGAKGFPGEAGPPGLGLPGPKGERGFPGDAGLPGPPGFQGPPGPPGTPGQIDCDTGV
KRPIGGDGQDAVHPDCVRGPQGSPGLQGLPGPAGVKGLRGIPGFPGADGAPGLKGFPGDP
GREGFPGPPGFMGPRGSKGAAGLPGPDGFPGPIGLPGPAGPPGDRGLPGEVLGAQPGPRG
DAGLPGHPGLKGLPGDVGPPGFRGSQGMPGVPGLKGQLGLPGPSGHPGPTGPPGRHGFPG
APGQGGPPGLPGAPGLGGLPGDRGEPGDTGAPGPVGMKGLSGDRGEAGFLGEQGHRGNPG
FKGMAGMPGSPGQKGERGSPGMDGFQGMIGLTGRPGFPGSKGEAGFFGIPGLKGLPGQPG
VKGNRGDPGPPGPPPIILPGMKDIKGEKGDEGPMGLKGYLGLKGIQGMPGVPGLAGIPGL
PGRPGHIKGTKGDIGVPGVPGLPGFPGVAGPPGIVGFPGFTGSRGDKGAPGREGLYGETG
QTGDLGDVGDTIDLPGSPGLKGERGLTGIPGLKGFFGEKGTEGDVGFPGITGLTGAQGPP
GPKGQSGFPGLAGLQGPQGDPGRIGVPGEKGDYGWPGSPGLPGFPGFRGIGGLHGLPGTK
GFPGAPGADIHGDPGLPGPIGERGEPGEANTLPGPVGAPGQKGQQGVPGERGPAGSPGLQ
GFPGISPPSNISGLPGDVGAPGIFGLEGYRGPPGPPGPAALPGSKGEEGRPGASGITGSK
GWVGDPGPQGRPGVFGLPGEKGPKGEPGLMGNTGPSGPVGDRGPKGPKGDQGFPGAPGSV
GSPGIAGQPPKFAVQPGALGPQGRRGPPGAQGEMGPQGPPGEPGFRGTPGKAGPQGRGGV
SAVPGFRGDQGPMGHQGPIGQEGEPGRPGSPGLPGMPGRSTSIGYLLVKHSQTDQEPMCP
VGMNKLWSGYSLLYFEGQEKAHNQDLGLAGSCLARFSTMPFLYCNPGDVCYYASRNDKSY
WLSTTAPLPMMPVAEDEIQPYISRCSVCEAPAVAIAVHSQDVSIPHCPAGWRSLWIGYSF
LMHTAAGDEGGGQSLVSPGSCLEDFRATPFIECNGARGTCHYFANKYSFWLTTIPEQSFQ
SSPSADTLKAGLIRTHISRCQVCMKNL
NT seq
5124 nt
NT seq
+upstream
nt +downstream
nt
atgggccgagggccgacggcggcgcccggcgcggccctgcggcggtggctgctgctgggg
gctgcgaccctgtgcctggcccggggcgtcttggcgggtgtgaagaagtttgacgtgcct
tgtggagggagagactgcagcgggggctgccagtgctacccggagaaaggaggccggggc
cagccaggacccgtgggcccccaggggttcagcgggccaccagggctccaaggattccct
ggacttcaaggtcgcaaaggtgacaagggtgagcgcggagctcctgggacgactggacct
aaaggagaagtgggggccagaggcgtgtccgggttcccaggggccgatggaattccaggg
catccagggcaaggtgggcccaggggaaggcccggctacgacggctgcaacgggaccagg
ggcgacgcaggtccacagggaccctccggctctgggggcttccccgggtcccccgggccc
caaggacccaaagggcagaaaggtgaaccgtatgccttgtctgaagaggaccggggcaag
tacaggggcgagaccggagagcctgggctggttggtttccaggggcctcctggccgcccc
gggcctgttggacccataggtccagttggagctccaggaagaccgggaccacctggaccc
cctggaccaaaaggacagccaggcaacagaggacttggtttctatggagaaaagggcgaa
aagggcgacatcggccagccgggacccaatggcattccatccgacaccacactcatcggg
cccacgaccaccacgtaccgcccggatcagtataagggtcaaaaggggagtgagggagag
ccggggattccgggcgtctcgttgaagggcgaggaaggcgtcatgggcttcccaggagct
cggggttttcctggcctcgatggagagagaggagctcaaggacagaaaggaagcaagggt
ctggatggcttccaaggccccgggggacccagaggacccaagggagaacagggggaacga
ggccccccgggaccaccggcctactccccccatccttccctggccaaaggcgacagaggt
gacccgggattcccaggggctcatggggagccaggattccggggcgagccaggagacccc
ggcacggtgggacccccagggccgaccatcggagttggagatgagaggagaggcctggtg
ggcgagatgggccccaaaggctttcccggtgacccaggcctccctgcccggtaccccggc
ctacctggagcggacggcaaacccgggctcccaggagcccccgggcctgcaggaccaccc
ggaccggacggtttcctgttcggccttaaaggagcaggaggaagagtgggctaccccggg
ccttccggcttcccaggcacccgaggacagaaagggtggaaaggtgactctggggactgc
aagtgtgcagatgatttccccgggggcctccccggacgacccggacccaagggctttcca
ggcatcaatggcgagcccggaaggaaaggccagcaaggggacccagggcagcacggcatc
cctgggttcccagggttcaagggagcccccggcctggctggaatccctggccccaaggga
atcaaaggagactcaaggaccgtcaccaccaaaggtgagagggggcagccaggggttccc
ggtgtgcacgggatgaagggtgatgatggcgtccccgggcgtgatgggctcgacggattc
cccggcctcccgggcccccctggcgatggcatcaagggccctccaggggactccggctac
tcaggcattcctggagccaagggctttccaggagaagcgggacccccgggactgggctta
ccaggcccaaagggagagcgtggtttcccaggagatgccggactgcctggacccccaggc
tttcaggggcctcccggacctccaggaaccccaggacaaatagattgtgacactggcgtg
aaaaggcccattggaggtgatggacaagatgccgttcatccagattgtgttcgaggacca
cagggatcacccggcctgcaaggattaccgggccccgcaggtgtcaaaggcctcagagga
ataccaggattcccgggagctgacggagccccaggactcaaaggcttcccaggagaccca
ggtcgcgaaggcttccccgggcccccagggttcatgggaccccgaggatcaaaaggggcc
gcaggcctcccaggccccgatggattcccaggccccatcggcctgccggggccagctgga
cctcctggggacaggggccttccaggagaagtgctgggggcccagcccgggccgcgagga
gatgcgggactgcctggacaccctgggctcaaaggccttccaggagacgtaggcccgccc
ggattcagaggaagccaagggatgcctggcgtgccagggctcaagggccagctgggcctc
cctggaccttcgggtcatccaggaccaaccggacctcccggacggcacgggttcccagga
gctcctgggcaaggaggacccccagggctgccaggagccccaggtcttggaggcctgccc
ggtgacagaggggagcctggcgatactggtgcccccggcccagtgggtatgaagggtctc
tccggcgacagaggcgaagctggcttcttaggcgagcaaggtcatagaggaaaccctgga
tttaaaggaatggccggcatgcccggctcccctgggcagaaaggagagcgtggctcacct
gggatggatggcttccagggaatgatcggactcacgggaagacctggcttcccaggctcc
aaaggagaggctgggttttttggaatacctggtctgaagggcttaccgggccagccaggt
gttaaaggcaaccgaggagaccctggtcccccaggaccgccacccatcatcctgccgggg
atgaaggacattaagggggagaaaggagacgagggacccatgggcctaaagggttacctg
ggcttaaaaggtatccaaggaatgccaggggtcccggggctggcaggaatccctggctta
cccgggaggcccggccacatcaaaggaaccaaaggagacatcggagtccccggcgtaccc
gggctgccaggattccccggcgtggctggtcctcccggaattgtagggttcccggggttc
acaggaagcaggggtgacaaaggtgctcctggcagagaaggcctctacggtgagactggc
caaacaggggacttaggtgatgtcggagacaccatagatctaccaggaagtccaggactg
aaaggggaacggggccttaccggcataccaggtctcaagggattcttcggagagaaagga
acagagggcgatgtgggctttcctgggataacaggcctgacgggagcccaaggccccccc
ggacctaaaggacagtcaggcttcccggggctcgctgggctgcagggtccgcagggcgac
ccggggcggatcggagtgcccggtgagaaaggagactatggctggccaggcagtccaggc
ttgccaggttttcctggattccgcggcatcggtggcttacacggcctgccaggcaccaaa
ggcttccctggggcaccaggtgccgacatccacggagacccggggttgccaggccccatc
ggggagaggggtgaacccggagaggccaatacccttccaggcccagtgggggccccaggc
cagaaaggacagcagggagtgccaggtgagcgaggcccagctgggagcccaggcctgcag
ggcttccccggcatcagccccccttccaacatctccggactgccgggtgacgtaggagcc
ccagggatcttcggcctagaaggataccgaggcccgccaggaccccctgggcctgccgct
cttcctgggagcaaaggagaggagggaaggcccggagcctcgggaatcaccgggtccaaa
ggatgggtcggggacccagggccccagggccggcctggcgtgtttggtctcccaggagaa
aaagggccaaagggcgagccagggcttatgggcaacactggaccttccgggcctgtgggt
gacagaggccccaaggggcccaaaggagaccagggattccccggagctcctggctcggtg
gggtcccctggcatcgcaggacagcccccgaagtttgctgtgcagcccggagcactgggt
ccccaggggcggagaggcccgcctggggctcagggggagatggggccccaggggcctcct
ggagagccaggttttcgagggaccccagggaaggctggacctcagggaagaggtggcgtg
tctgctgttccagggttccggggagaccaagggcccatggggcaccagggcccaattgga
caagagggggaaccaggccgtccagggagccctggcctgcctggcatgcctgggcgcagc
accagcatcggctacctcttggtgaagcacagccagacggaccaggagcccatgtgccca
gtaggcatgaacaagctgtggagcggctacagtctgctgtactttgaaggccaggagaag
gctcacaaccaggacctggggctggctggctcctgcctggcccgcttcagcaccatgccc
ttcctgtactgcaaccccggcgacgtgtgctactatgccagccgcaacgacaagtcctac
tggctgtccaccaccgccccgctgcccatgatgcccgtggccgaggacgagatccagccc
tacatcagccgctgctccgtatgcgaggcgccggcggtggccatcgctgtccacagccaa
gacgtctccataccccactgccccgccggctggcgcagcctgtggatcggctactccttc
ctcatgcacacagctgctggggacgagggcggcggccaatcgctggtgtcgccgggcagc
tgtctggaggacttccgcgccacgcccttcattgagtgtaacggggcccgagggacctgc
cactacttcgccaacaagtacagcttctggctgaccaccatccccgagcagagcttccaa
agctcaccctcggccgacacgctgaaggccggcctcatccgcacgcacatcagccgctgc
caggtgtgcatgaagaacctgtga
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integrated database retrieval system
