Dipodomys spectabilis (banner-tailed kangaroo rat): 122122885
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Entry
122122885 CDS
T07891
Symbol
Sox1
Name
(RefSeq) transcription factor SOX-1
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dsp03000
]
122122885 (Sox1)
Transcription factors [BR:
dsp03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
122122885 (Sox1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
122122885
NCBI-ProteinID:
XP_042553253
LinkDB
All DBs
Position
Unknown
AA seq
385 aa
AA seq
DB search
MYSMMMETDLHSPGGGGGAQAPTNLSGPAGAGGGGGGGGGGAKAGQDRVKRPMNAFMVWS
RGQRRKMAQENPKMHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLRALHMKEHPDYKYRP
RRKTKTLLKKDKYSLAGGLLAAGAGGGGAAVAMGVGVGSAAVGQRLESPGGAAGGGYAHV
NGWANGAYPGSVAAAAAAAAMMQEAQLAYGQHPGAGGAHPHAHPAHPHAHHPHAHPHNPQ
PMHRYDMGALQYSPISNSQGYMSASPSGYGGLPYGAAAAAAAAAAGGAHQNSAVAAAAAA
AAASSGALGALGSLVKSEPSGSPPAAAHSRAPCPGDLREMISMYLPAGEGGDPAAAAAQS
RLHSLPQHYQGAGAGVNGTVPLTHI
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatgatgatggagaccgacctgcactcgcctggcggcggcggcggcgcccag
gcccccacgaacctctcgggcccggccggggcgggcggcggcggtggaggcggcggcggg
ggcgcgaaggccggccaggaccgggtcaagcggcccatgaacgccttcatggtgtggtcg
cgcgggcagcggcgtaagatggcccaggagaaccccaagatgcacaactcggagatcagc
aagcgcctgggtgcggagtggaaggtcatgtccgaggcggagaagcggccgttcatcgac
gaggccaagcggctgcgcgcgctgcacatgaaggagcacccggattacaagtaccggccg
cgccgcaagaccaagacgctgctcaagaaggacaagtactcgctggccggcgggctgctg
gcggcgggcgcgggcggcggcggcgcagccgtagccatgggcgtcggcgtgggctccgcg
gccgtgggccagcgcctggagagcccgggcggcgcggcgggcggcggctacgcgcacgtc
aacggttgggccaacggcgcctacccgggctcagtggccgccgccgcagcggccgcggcc
atgatgcaggaggcgcagctggcctatgggcagcacccgggcgcgggcggcgcgcacccg
cacgcgcatccggcgcatccgcacgcgcaccacccgcacgcgcacccgcacaacccgcag
ccgatgcaccgctacgacatgggcgcgctgcagtacagccccatctccaactcgcagggc
tacatgagcgcgtcgccctcgggctacggcggcctcccctacggggccgccgctgccgcc
gccgccgccgccgcgggcggcgcgcaccagaactcggcggtggcggcggcggcggcggcg
gcggccgcgtcgtcgggcgcgctgggcgcgctgggctcgctggtgaagtcagaaccgagc
ggcagcccgcccgccgcggcgcactcgcgggcgccgtgccccggggacctgcgggaaatg
atcagcatgtacctgccggcgggcgagggcggcgacccggcggcggcggcggcgcagagc
cggctgcattcgctgccgcagcactaccagggcgcgggcgcgggcgtgaacggcacggtg
cccctgacgcacatctag
DBGET
integrated database retrieval system
