Dipodomys spectabilis (banner-tailed kangaroo rat): 122122937
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Entry
122122937 CDS
T07891
Symbol
Neo1
Name
(RefSeq) neogenin
KO
K06766
neogenin
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp04350
TGF-beta signaling pathway
dsp04360
Axon guidance
dsp04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
122122937 (Neo1)
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
122122937 (Neo1)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
122122937 (Neo1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
dsp04515
]
122122937 (Neo1)
Cell adhesion molecules [BR:
dsp04515
]
Immunoglobulin superfamily
DCC/UNC5 family
122122937 (Neo1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neogenin_C
fn3
I-set
Ig_3
Ig_2
Pur_ac_phosph_N
ig
FN3_DSCAM-DSCAML_C
Fn3_VIN3
V-set
Interfer-bind
C2-set_2
Ig_5
fn3_2
fn3_SORL1
Tissue_fac
Fn3_R-PTP-O
SusE
EphA2_TM
TMEM154
TM_ErbB1
Herpes_UL74
FAM176
DUF4998
Motif
Other DBs
NCBI-GeneID:
122122937
NCBI-ProteinID:
XP_042553318
LinkDB
All DBs
Position
Unknown
AA seq
1449 aa
AA seq
DB search
MAAERGARRPGGPSAASWLCCVLWLLLGRPAAAARSGSPGPAAGASVRTFTPFYFLVEPV
DTLSVRGSSVILNCSAYSEPSPKIEWKKDGTFLNLVSDDRRQLLPDGSLFISNVVHSKHN
KPDEGYYQCVATVDSLGTIVSRTAKLIVAGLPRFISQPEPSSVYAGGSAILNCDVNADLV
PFVRWELNKQPLLPDDRVVKLPSGTLVISNVTEGDGGLYRCIVESGGPPKYSDEAELKVL
PDLEETPNLVFLKQPSSLVRVLGQSAVLPCVASGLPIPAVRWMKNEEALDVESSERLALL
AGGSLEISDITEDDAGTYFCIADNGNETIDAQAELTVQAQPEFLKQPANIYAHESMDIIF
ECEVTGKPTPTVKWVKNGDMVIPSDYFKIVKEHNLQVLGLVKSDEGFYQCIAENDVGNAQ
AGAQLIILEHAPATTGPLPSAPRDVVASLVSTRFIKLTWRTPASDPHGDNLTYSVFYTKE
GTARERVENTSRPGEMQVTVQNLMPATVYIFRVMAQNKHGSGESSAPLRVETQPEVQLPG
PAPNIRAHTTSPTSVTITWETPLSGNGEIQNYKLYYMEKGTDKEQDVDVSTHSYTINGLK
KYTEYSFRVVAYNKHGPGVSTQDVAIRTLSDVPSAAPQNVSLEVRNSKSIRIHWQPPSPA
TQNGQITGYKIRHRKASRKSDVTETLVPGTQLSQLIEGLDRGTEYNFRVAALTVNGTGPA
TDWLSAETFESDLDETRVPEVPSSLHVRPLVTSIVVSWTPPENQNIVVRGYAIGYGIGSP
HAQTIKVDYKQRYYTIENLDPSSHYVITLRAFNSVGEGVPLYESAVTRPHTDTSEVDLFV
INAPYTPVPDPTPMMPPVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIP
ANTKYKNANATTLSYLVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTTFELVPTSPPKD
VTVVSKEGKPKTIIVNWQPPSEANGKITGYIIYYSTDVNAEIHDWVIEPVVGNRLTHQIQ
ELTLDTPYYFKIQARNSKGMGPMSEAVQFRTPKASGSAGKGSRLPDLGSDYKPPMSGSNS
PHGSPTSLDSNMLLVIIVSVGVITIVVVVIIAVFCTRRTTSHQKKKRAACKSVNGSHKYK
GNSKDVKPPDLWIHHERLELKPIDKSPDPNPIMTDTPIPRNSQDITPVDNSMDSNIHQRR
NSYRGHESEDSMSTLAGRRGMRPKMMMPFDSQPPQPVISAHPIHSLDNPHHHFHSSSLAS
PARSHLYHPGSPWPVGTSLSLSDRANSTESVRNTPSTDTMPASSSQTCCTDHQDPEGATS
SSYLASSQEEDSGQSLPTAHVRPSHPLKSFAVPAIPPPGPPTYDPALPSMPLLSQQALNH
HIHSVKTASIGTLGRSRPPMPVVVPSAPEVQETTRMLEDSESSYEPDELTKEMAHLEGLM
KDLNAITTA
NT seq
4350 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggagcgcggcgcccggcgccccggcggcccctccgcggcgtcctggctctgc
tgcgtgctgtggctgctgctcgggcgcccggccgcggccgccaggagcggctccccgggg
ccggcggcaggagccagtgtccgaacattcactccattttatttcctggtggagccagtg
gacacactctcagttcgaggctcttctgttatattaaattgctcagcatattctgagcct
tcgccaaaaattgaatggaaaaaagatgggacttttttaaacttagtatcagatgatcga
cgccagctacttccggatggatctttgtttatcagcaatgtggtgcattccaaacacaat
aaacccgatgaaggttactatcagtgtgtagccactgttgatagtcttggaactattgtc
agcagaacggccaagctcatagtagcaggtcttccgagatttatcagccaaccagaacct
tcctcagtttatgctggaggcagtgccattctgaattgtgatgttaatgcagatttggtc
ccgtttgtgaggtgggaactgaacaagcagccccttcttccggatgacagagttgtgaag
cttccaagtggcacactggttatcagcaatgtgactgaaggagacgggggactctatcga
tgcatagttgaaagcggagggccaccgaagtacagtgatgaagctgaactgaaagttctt
ccagatctcgaggaaacgccaaacttggtatttttgaaacagccatcttccttagtcaga
gtgcttggtcagagtgcagtgttgccctgtgttgcttcgggacttcctattccagctgtt
agatggatgaaaaatgaggaagcacttgatgtagaaagctctgaaagattggccttgctg
gcaggtggtagcctggaaatcagtgatatcactgaggatgacgcagggacgtatttctgc
atcgcagacaatggaaatgagacaattgatgcacaggcagagcttacagtgcaagcccaa
cctgaatttttaaaacaacctgctaatatatatgctcatgagtccatggatattatattt
gagtgtgaagtaactgggaagccaacgccaactgtgaaatgggtcaagaatggggacatg
gtcatcccaagtgattacttcaaaattgtaaaggaacataatcttcaagttttgggtctg
gtgaaatcagatgaagggttttatcagtgcattgccgagaatgatgttggaaatgcgcag
gctggagcccagctcataatccttgaacatgcaccagccacaacgggaccactgccttca
gctcctcgggacgtcgtggcctccctggtctctacccgcttcatcaaattgacatggcgg
acaccggcttcagatccccatggagacaacctcacctattcagtgttctacaccaaggaa
ggcactgctagggagcgtgttgagaataccagtcgcccaggagagatgcaggtaaccgtt
caaaacttaatgccagcgactgtatacatcttcagagttatggcccaaaataagcatggc
tcaggagagagttcagctccactacgagtagaaacacagcctgaagttcagctccctggc
ccagcccctaacatccgagctcacactacgtcacctacttccgtcaccatcacgtgggag
acaccactgtcaggcaatggggaaattcagaactacaaattgtactacatggaaaaagga
actgataaagagcaggatgtggatgtttcaactcactcctacaccattaatgggctgaaa
aaatacacggagtatagtttccgggtagtggcctacaataaacatggtcctggagtctcc
acacaggatgttgccattcggaccctgtcagatgttcccagtgctgctcctcagaatgtg
tccttagaagtgagaaactccaagagtattaggattcactggcagccaccttctccagct
acacaaaacgggcagatcactggctacaagattcgccaccgaaaggcctcccgcaagagt
gatgtcactgaaaccttggttcctgggacccagctgtctcagctgattgaaggtctcgat
cgggggactgagtataattttcgagtggctgctctcacagtcaatggtacaggcccagca
actgactggctgtctgctgaaacttttgaaagtgacttagatgaaactcgggttcccgaa
gtgcctagctctcttcacgttcgcccacttgtcaccagtattgtagtaagctggactcct
ccagagaatcagaacattgtggttcgaggctatgccattggttatggcattggcagccct
catgcccagaccatcaaagtggactataaacagcgctattacaccattgaaaatttggat
ccgagttctcattatgtgattaccctgagagcattcaacagcgtcggcgaaggcgtccca
ctgtacgagagcgcagtgaccaggcctcacacagacacttctgaagttgatttgtttgtt
attaatgctccatacactccagtgccagatcccactcccatgatgccacccgtgggagtt
caggcttccattctgagtcatgacaccataaggatcacgtgggcagacaactcactgccc
aaacaccagaagattacagactcccggtactacacagtccgatggaaaactaacatccca
gccaacaccaagtacaagaatgcaaatgcaacaactttgagttatttggtgactggttta
aaaccaaatacactctatgaattctctgtgatggtgaccaaaggtcgaagatcaagcacc
tggagtatgacagcccatgggaccacctttgaattggttcctacttctccacctaaggat
gtgactgttgtgagcaaagaggggaaacccaaaaccataattgtgaactggcagcctccc
tctgaggccaatggcaaaatcacaggttacatcatctattacagtacagacgtgaatgca
gagatacatgactgggttattgagcctgttgtgggaaacagactgactcaccagattcag
gagctaacacttgatacaccatactacttcaagatccaggcccgaaactcaaaaggcatg
gggcccatgtctgaagctgtccaattcagaacgccaaaagcctcagggtctgcaggaaaa
ggaagccggctgccagacctaggatccgactacaaacctcccatgagtggcagcaacagc
cctcacggaagcccaacgtctctagacagcaacatgctgctggtcatcatcgtctctgtt
ggcgtcatcaccattgtggtggtggtgatcattgccgtcttttgtactcggcgcaccacc
tctcaccagaaaaagaaacgagctgcctgcaaatcagtgaatggctcccacaagtacaaa
ggtaactccaaggatgtgaaacctccagatctctggatccatcacgaaaggctggagctg
aagcccattgataagtccccagacccaaatcctatcatgacggatactccaattcctcgc
aattctcaagatatcacaccggttgacaattccatggacagcaatatccatcaaaggcga
aattcatacagagggcatgagtcagaggacagcatgtctacattggctggaaggcgggga
atgagaccaaaaatgatgatgccttttgactctcagccaccccagcctgtgattagtgcc
catcccatccattccctcgataaccctcaccatcatttccactccagcagcctcgcttct
ccagcccgcagtcatctctaccacccgggcagcccatggcccgttggcacatccttgtcc
ctttcagacagggccaattccacagaatctgttcgaaacacccccagcactgataccatg
ccggcctcctcgtcccagacctgctgcactgaccatcaggatcctgaaggtgctaccagc
tcctcttacttggccagctcccaagaggaagattcaggccagagccttcccacagcccac
gttcgcccctctcacccattgaagagcttcgcagtgccagcaatcccacccccaggacct
cctacctatgatcctgcattgccaagcatgccattactgtcccagcaagctctgaaccat
catattcactcagtgaagacggcttccattgggactttaggaaggagccggcctcctatg
ccagtggttgttcccagtgcccctgaagtacaggagaccacgaggatgctggaagactcc
gagagtagctatgaaccagatgagctgaccaaagagatggcccacctggaaggactgatg
aaggacctaaatgccatcacgacagcatga
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integrated database retrieval system
