Dipodomys spectabilis (banner-tailed kangaroo rat): 122122959
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Entry
122122959 CDS
T07891
Symbol
Lrrc49
Name
(RefSeq) leucine-rich repeat-containing protein 49 isoform X1
KO
K16606
leucine-rich repeat-containing protein 49
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
dsp03037
]
122122959 (Lrrc49)
04812 Cytoskeleton proteins [BR:
dsp04812
]
122122959 (Lrrc49)
Cilium and associated proteins [BR:
dsp03037
]
Primary cilia and associated proteins
Tubulin polyglutamylase and associated proteins
122122959 (Lrrc49)
Cytoskeleton proteins [BR:
dsp04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Tubulin modification proteins
Tubulin polyglutamylase complex components
122122959 (Lrrc49)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_9
LRR_4
LRR_8
LRR_14
FTH
TAFII28
LRR_6
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
122122959
NCBI-ProteinID:
XP_042553335
LinkDB
All DBs
Position
Unknown
AA seq
751 aa
AA seq
DB search
MIPGRYRSASGRAANNVNCGLHLVIQTSSLPEKNKVDFKINRETPPFPGRLLQHDLERNY
SSRQGDGRVVSPSPRNKSSCLSPTTNLTEMCGLDMKSGASSLSAFGDSSFQTPSKYRVRQ
GCHSAGPDVSGDHINLVSSSMPSFPILQRSTEEKILYSDRLTLERQKLTVCPIIDGEEHL
RLLNFQHNFITQIQNISNLHRLIFLDLYDNQIEEISGLSTLRSLRVLLLGKNRIKRISNL
ENLKLLDVLDLHGNQITKIENVNHLCDLRVLNLARNHLSHVDNLNGLDSLTELNLRHNQI
TYVRDVDNLPCLQRLFLSFNNICSFESVACLADSTSLSDITFDGNPIAQESWYKHTVLQN
MMQLRQLDMKRVTEEERRVASVVAKKEEEKKRESHKQSLLKEKKRLTIHNVARKWGLQQQ
RMASQETRGSDSPPQDPCQVPLDSSLISVLPEETGSVDSGLSSALQGLSVADTHLVEIDG
DTLSLYGSGALESLDRNWSMQTVGAVTTISFTFIEFDEIVQVLPKLKMKFPNPLHLKFKE
TNLVMLQQFNALAQLRRIDQLTIDPQGNPVVNFTLWKYYVLFRLSHFGMQKINGTEVTQN
DMVMAERLFGILAHVASSELPQYRLISILGDARRKHFRYLLDTKGKKPCVLPEENNDSKR
LMGENTNRATLNYTTREFYTEKLEEIKDKKRFCQMYVGDLVKEAADINTKNEALQRLWPQ
MFIELVRDAVLEIRNKNSYMQLCLQQIADQK
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atgattcccgggaggtaccgctccgcctcgggccgggccgcgaacaacgtgaactgtggg
cttcatctggttattcagacatcttcccttcctgaaaagaacaaagttgatttcaagatt
aacagagaaacaccaccatttccgggtaggctcttacaacatgacctggaaagaaactac
tcaagcaggcaaggagacggaagagtcgtaagtccttcgcctcgtaataaatcatcctgc
ctctcgcccacaacaaacctgacagagatgtgtggtttggacatgaaaagcggtgccagc
tccttgtccgcctttggagattcttcctttcagacaccttcaaagtaccgagtccggcag
ggctgccatagcgcaggccccgatgtatctggtgatcatattaatttggtgagctcatca
atgccatcctttcctattctccagcgttctaccgaagagaaaattctttactcagacagg
ctgaccctagaaaggcagaagctgactgtgtgtcctatcatcgatggggaagagcacctt
cgcttgctcaacttccagcacaattttataactcagatccagaatatttctaatctgcat
aggctgatattcctggacctatatgacaaccagattgaggagatcagtgggctctccacc
cttcggtccctccgcgtcctcctcttggggaagaacagaatcaaaagaatctcaaatctg
gagaatctgaaactcttagatgtcttggaccttcatggaaatcagattaccaaaattgaa
aatgtcaatcacttgtgtgatttaagagttttaaaccttgcccggaaccatttaagtcat
gttgataatcttaatggtctggattccctaactgaactaaaccttcggcacaaccaaatc
acttatgtgagagatgtggataacctgccctgcctccagcgcctgtttctcagcttcaac
aacatttgtagctttgaaagtgttgcctgccttgccgactccacctcgctatccgacatc
acttttgatggcaaccccatagctcaggagtcatggtacaagcacacggtccttcagaac
atgatgcagctgcgccagctcgacatgaagagggtcacggaagaagaaaggcgcgtggcg
tctgttgtggccaagaaagaagaggagaagaagcgtgagagccataaacagtccttgctg
aaggagaagaaaaggttgacgattcacaatgtagccaggaagtggggcctgcagcagcag
cgcatggccagccaggagacgaggggttcagactcgccgccccaggacccctgccaggtc
ccgctggacagcagcctcatctctgtccttccagaggaaaccgggtccgtggactcggga
ctcagcagtgccctgcagggcctgtcagtggcagacacgcacctggtcgagatcgacggg
gacacactgtcactctatggctcgggcgccctggagtcgctggaccggaactggagcatg
cagactgtgggggccgtcaccaccatctccttcaccttcatcgagttcgatgagattgtg
caggtgctgcccaagctgaagatgaagttccccaaccccctgcaccttaagttcaaggaa
accaatctggtgatgttgcagcagtttaacgctctggcccagcttcggcgcattgaccag
ctaaccattgacccgcaaggaaatcctgtggtcaattttacactctggaaatactatgtg
ctgttccgcctgagccattttggtatgcagaagatcaatgggacggaggtgacacagaat
gacatggtgatggccgagcggctcttcgggatcctggcacacgtggcgtcctcagagctg
ccgcagtaccgcctcatctccatcctgggcgatgccaggagaaagcacttccgctacctg
ctggacaccaaggggaagaagccgtgcgtgctcccagaagagaacaatgacagcaagaga
ctcatgggggaaaacacaaaccgcgccacactcaactacaccaccagggaattctatacg
gagaagctggaggagatcaaggataaaaagagattctgccagatgtacgtgggagacctt
gtgaaggaagccgcggacatcaacacaaagaacgaggctctgcagaggctgtggccgcag
atgttcatcgagctggtgcgggacgccgtgctggagatccgcaacaagaactcatacatg
cagctctgcctgcagcagatcgccgaccagaagtag
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