KEGG   Dipodomys spectabilis (banner-tailed kangaroo rat): 122123272
Entry
122123272         CDS       T07891                                 
Symbol
Gemin5
Name
(RefSeq) gem-associated protein 5 isoform X1
  KO
K13133  gem associated protein 5
Organism
dsp  Dipodomys spectabilis (banner-tailed kangaroo rat)
Brite
KEGG Orthology (KO) [BR:dsp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dsp03019]
    122123272 (Gemin5)
   03041 Spliceosome [BR:dsp03041]
    122123272 (Gemin5)
Messenger RNA biogenesis [BR:dsp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     122123272 (Gemin5)
   mRNA cycle factors
    P-body specific factors
     122123272 (Gemin5)
Spliceosome [BR:dsp03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   SMN complex factors
    122123272 (Gemin5)
SSDB
Motif
Pfam: GEMI5_RBS TPR_GEMI5 Beta-prop_THOC3 WD40_CDC20-Fz Beta-prop_WDR3_1st Beta-prop_RIG_2nd Beta-prop_WDR5 Beta-prop_EML_2 WD40_Prp19 WD40 WD40_WDHD1_1st ANAPC4_WD40 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR3_2nd WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd Beta-prop_HPS5 EIF3I Beta-prop_RIG_1st Beta-prop_WDR19_1st Beta-prop_IFT140_1st Beta-prop_EML Beta-prop_Aladin WD40_Gbeta Beta-prop_WDR75_1st WDR90_beta-prop_4th Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_EIPR1 WD40_RFWD3 Beta-prop_WDR41 MIOS_WD40 WD40_MABP1-WDR62_1st Beta-prop_WDR35_TULP_N NBCH_WD40 WD_LRWD1 Tricorn_2nd
Other DBs
NCBI-GeneID: 122123272
NCBI-ProteinID: XP_042553568
LinkDB
Position
Unknown
AA seq 1515 aa
MGLEPRTLPPSPNWYCTRCSDAVPGGLFGFAARTSVFLVRVGPGAGAIPGTPPFRVIGEL
VGHTEKVSGFTFSHHPGQYHLCATSSDDGTVKIWDVETKTVVTEHALHQHTISALHWSPR
VKDLIVSGDEKGVVFCYWLNRNDSQHLFIEPRTIFCLTCSPHHEDLVAIGYKDGIVVIID
ISKKGEVIHRLRGHDDEIHSIAWCPLPGEDCLSLNQEENSEEPEITNGKVKTETPETKGC
YLATGSKDQTIRIWSCSRGRGVMILKLPFLKRRGGGIDPTVKERLWVTLYWPKNQPTQLI
SSCFGGELLLWDLTQSWRRKYTLFSTSAEGQNHSRIVFNLCPLQTEDDKQLLLSTSMDRD
VKCWDMATLECCWTLPSLGGFAYSLAFSPVDLGCLAIGVGDGMIRVWNTLSIKNNYDVKN
FWQGVKSKVTALCWHPNKEGCLAFGTDDGKVGLYDTYSNKPPQISSTYHKKTVYTLAWGP
PVPPMPLGGEGDRPSLTLYSCGGEGIVLQHNPWKLSGEAFDINKLIRDTNSTKYKLPVHT
EISWKADGKIMALGNEDGSIEIFQVPNLKLICIIQQHHKLVNTITWHHEHGSQPELSYLM
ASGSNNAVIYVHNLKTVIESNPESPVTMTEPYRTLSGHTAKITSLAWSPHHDGRLVSASY
DGTAQVWDTLREEPLCNFRGHRGRLLCVAWSPLDPDCIYSGADDFCVYKWLISMQDHSRP
PQGKKSIELEKKRLSQPKPKAKKKKKPTLRMLIKQESLEGNEESIKENSVPTENGVSDQE
GEEEAQEPESPCGLTAMDARESIVCTPVSSSFEKSKVTINNKVTLLKKEPPKEKSEASIK
KRKARSMLPLSTSLDHRSKEELHHDCLVLATAKHSKERNEDMSADLEERFHLGLFTDRPT
LYRMIETEGKGHLENGHPELFHQLMLWKGDLKGVLQTAAERGELTDNLVAMAPVAGYHVW
LWAVEAFAKQLCFQDQHVKAASHLLSIHKVYEAVELLKSNHFYREAIAVAKARLRPEDPV
LKDLYLSWGTILERDGHYAIAAKCYLGATSTYDAAKVLAKKGDAASLRTAAELAVIVGEN
ELSASLALRCAQELLLAKNWVGAQEALQLHESLQGQRLVFCLLELLCKHLEEKQLPEGRT
SSSSSSYHSWAASTEGPFVQRVTTVWKSVFSLDTPGKYHTALKKLQDVKYPSATNNTPSK
QLLLHICHDLTLVVLNQQVASWDEAVIALLRAVVRSYDSGNFTIMQEVHWTFLPDGCDHL
RDKLGDDQSPATPAFKSLEAFYIYGQLYEIWWSLSRSESSVWAIAGHKRTPLVKESQQPD
SPSTEETGSRAGSPQEPHWPPQSDLRLTERSQRVLRACKELLSEKHAILQDSQRTVAGVQ
ETLAEMIRQHQKSQLCKSTTSSPDKNELEQETEQQVPSAQSQCKEETNEPVSLPELTKRL
TEANERIAKFPESMKTWPFPDVLECCLVLLCIKSQCPGCVTQEMQQQAQELLRKYGTTKT
YRRHCQTSACELERT
NT seq 4548 nt   +upstreamnt  +downstreamnt
atggggctggagccgcggacgctgccgccctctccgaactggtactgcacccgctgcagc
gacgcggtgcccggggggctctttggcttcgccgcgcggacctccgtcttcctggtccgc
gtgggcccgggtgcgggtgccatcccggggacgcccccgtttcgagtcataggagagttg
gtgggacacaccgaaaaggtctccggcttcaccttttctcatcaccccggtcagtaccac
ctctgtgccaccagttcagacgatggaaccgtgaagatctgggatgtagagacgaaaaca
gtagtgacggagcatgcacttcatcagcatacaatatcagcattgcactggtctcctcga
gtgaaggatttaattgtgtctggggatgaaaaaggagttgtattctgttattggcttaac
agaaatgacagccagcacctctttatagagcccaggacaattttctgtcttacttgttca
cctcaccatgaagatttagtggccattggctacaaggatggcatagtggttataattgac
atcagtaagaaaggagaagttattcacaggcttcgaggccacgatgatgagatccactcc
atagcctggtgtcccctacctggtgaagattgcttatccttaaaccaagaggaaaattca
gaagaaccagaaattaccaatgggaaagttaaaacagaaactccagaaacaaagggctgc
tacttagccactggaagcaaagatcagacaattcgaatctggagctgctctagaggccga
ggagtgatgattttgaaattgccctttctgaaaagaagaggaggaggcatagacccaact
gttaaagaacgtctttgggtaacactctattggcccaagaatcagccaacacagctgata
tccagttgttttggaggcgaactgctgctgtgggatctcacccagtcttggagacggaaa
tataccctttttagtacatcagcagaaggacaaaatcactccagaattgtgtttaattta
tgtcctttgcaaactgaagatgacaaacagctgctactttctacatcaatggatagagat
gtcaaatgttgggacatggccaccctagaatgctgctggaccctgccttcccttggtggg
ttcgcctacagcctggctttttctcctgtggatttaggctgtttagccataggcgttggg
gatggtatgatccgtgtatggaatacactatccataaagaacaactatgatgtaaaaaat
ttttggcaaggtgtcaaatccaaagttacagcgctgtgctggcacccaaacaaagaaggt
tgtttggcttttggaactgatgatggaaaagtgggattgtatgacacctattctaacaaa
cctccacagatttctagcacatatcataagaagactgtgtacacattagcctggggtcca
ccagtgcctcccatgccactcggaggagaaggagacagaccttccctcactttatacagc
tgtggaggggaagggattgtcttacagcataacccctggaagctgagtggtgaggccttt
gacatcaacaaactcatcagggacaccaattctaccaaatacaaattgcctgtacacaca
gagatcagctggaaagcagatggcaaaatcatggctcttggcaatgaagatggatcaata
gaaatatttcaggttcccaacttgaagctgatctgcatcatccagcagcatcacaaactt
gtgaacaccattacctggcatcatgaacatggcagccaaccggagctcagctatctgatg
gcttcgggctccaacaatgcagtcatttatgtacacaatctgaaaactgtcatagagagc
aatcctgagtctccagtgaccatgacagaaccctaccggaccctctcaggacacacagca
aagattaccagtctggcatggagcccacatcatgatgggaggctagtgtctgcttcctac
gatggaacagcacaggtgtgggatactcttcgagaagagcctctatgcaactttcgagga
catcgaggccgactgctctgtgtagcatggtccccattggatccagattgcatctactca
ggggcagatgacttctgcgtgtacaaatggctgatttccatgcaagaccattctaggcct
cctcaaggcaaaaaaagtattgaattagagaaaaaacggctctctcaacctaagccaaag
gccaagaaaaagaaaaaacctaccttgcgcatgcttataaagcaggagtcgcttgaaggg
aatgaagagagcataaaggagaactcagtacccacagagaacggcgtgtcagaccaagag
ggcgaagaggaagcccaggagccagagtcaccctgtggcctcactgccatggatgctaga
gaatcaattgtctgcactccagtttcttccagctttgaaaagtcaaaagttactattaat
aacaaagttactttactgaaaaaggaaccacctaaagagaaatcagaagcctcgatcaag
aagaggaaagctcggtccatgcttcctctgagtacaagcctagatcacaggtccaaagag
gaacttcatcatgactgtttggtgctagcaactgcaaaacactccaaagagcgaaatgag
gatatgtctgctgatcttgaggaaagatttcacctggggcttttcacagacaggcctacc
ctgtacagaatgattgagactgaagggaaagggcacttggaaaatggacaccctgaatta
tttcaccagctaatgctttggaaaggagatttaaagggtgttcttcagacggcagcagaa
agaggggagctgacagacaatcttgtggctatggcaccagtagctggctaccatgtgtgg
ctgtgggctgtggaagcctttgccaagcagctgtgtttccaagatcagcatgtcaaggct
gcatcacacctgctttccatccacaaagtatatgaagctgtggagctgctcaagtcaaac
cacttttacagagaagctattgcagttgccaaggcccggctgaggcccgaggacccagtc
ttaaaagacctgtacctcagctggggaaccatcctggaaagagatggccattatgccata
gcagccaaatgctatttaggtgccacttctacttatgatgcagccaaagttttggccaag
aagggggatgctgcatcacttagaacggctgcagagctggctgtgattgttggagaaaat
gagctctccgcttcgctagctctcagatgtgcccaagaattgctgctggccaagaactgg
gtgggagcccaggaagccttgcagctgcatgaaagtctacagggtcagagactggtattt
tgtctccttgagctactgtgcaaacatctggaggaaaagcagcttccagaaggcagaacc
tcctcctcctcctcctcttaccacagttgggcagcaagtacagaaggaccctttgtgcag
agagtaactacagtgtggaaaagcgtcttcagccttgacaccccagggaaataccataca
gccttgaagaagctgcaagatgtgaagtacccatctgctacaaataacacaccctccaag
cagctcctgctccacatttgccacgatctgaccttggtggtgctgaaccagcaggtggcc
tcctgggatgaggcagtgatagcactgcttcgggctgtggtccggagctatgactccggg
aatttcaccatcatgcaggaagtccactggacctttctccctgacggctgtgaccaccta
agagacaaactgggtgatgatcaatctcctgccacaccagcttttaaaagtttagaggcc
ttttatatatatgggcaactatatgaaatctggtggtctctgtccaggtctgagtccagt
gtgtgggcaatagctggccacaagaggacaccgttggttaaggagagccagcaaccagac
agtcctagtactgaagagactggctcaagagctggttctccgcaagagccacattggcct
ccccaatcagacttgagactcacagagagaagtcagcgcgtgctgagggcttgtaaggag
ctcctttcagaaaagcacgccattctccaggactcccagagaacagttgctggtgtccaa
gagacattagcagaaatgatccgccaacaccagaagagtcagctctgtaaatccacaacc
agcagccctgataagaatgaacttgaacaggaaacagagcagcaggtgcccagtgctcag
agccagtgtaaagaagaaacaaatgagccagtttctctgcctgaattaaccaaaaggctc
acagaggcaaatgagcgaatagctaaatttcctgagagtatgaagacctggcccttcccc
gatgtgctggagtgctgcctcgtcctgctgtgcatcaagtcccagtgtcctggctgtgtg
acgcaagaaatgcaacaacaggcccaggagctccttcggaagtatggcaccacaaaaaca
tacaggagacactgccagacctctgcgtgtgaacttgaaaggacctag

DBGET integrated database retrieval system