Dipodomys spectabilis (banner-tailed kangaroo rat): 122123781
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Entry
122123781 CDS
T07891
Name
(RefSeq) phospholipid-transporting ATPase ABCA3
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
122123781
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dsp02000
]
122123781
Transporters [BR:
dsp02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
122123781
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_23
AAA_30
AAA_15
RsgA_GTPase
AAA_22
SRP54
Motif
Other DBs
NCBI-GeneID:
122123781
NCBI-ProteinID:
XP_042554183
LinkDB
All DBs
Position
Unknown
AA seq
1702 aa
AA seq
DB search
MSVLRQLALLLWKNYTLKKRKVLVTILELLLPLLFSGILIWLRLKIQSENVPNATVYPSQ
SIQQLPFFFTLAPSVGTWELAYVPSHSEAARTVTETVKRALQVNIRVRGFPSEKDFEDYI
RYDNHSSNVLAAVVFEHVFNHSKDPLPLAVKYHLRFSCARRNYIWTQTGNFFLKETDGWH
TNSLFPLFPNPGPREPTSPDGGEPGYIREGFLVVQHAVDKAIMHYHANASTQQLFQKLTV
KAKRFPFPPFISDPFLIAIQYQLPLLLMLSFTYTSLTIIRSVVQEKERKLKEYMHMMGLS
SWLHWTAWLLMFFFFLLIAVSFMTLLLCIKVKKDIAVLSSSDPSLVLVFLLCFAISSISF
SFMVSTFFNKANIAAAVGGFLYFFTYIPYFFVAPHYNWMTLSQKLLSCLLSNVAMAMGAQ
LIGKFEAKGTGIQWRDLLSPVNVDDDFCFGQVLGMLLLDSVLYGLVTWYVEAVFPGQFGV
PQPWYFFLMPSYWCGSPRTVVGKEEEDSDPEKALRTEYFEAEPEDLVAGLKIKHLSKVFR
VGNKDKAAVRDLNLNLYEGQITVLLGHNGAGKTTTLSVLTGLYPPTSGRVYISGYEISQD
MALIRKSLGLCPQHDVLFDNLTVAEHLYFYAQLKGLSPQKCPEEVKHMLYALSMEDKRSL
RCKYLSGGMKRKLSIGIALIAGSKLLILDEPTSGMDAISRRAIWDLLQQQKSDRTILLTT
HFMDEADLLGDRIAIMADGELQCCGSSLFLKQKYGAGYHMTLVKEPHCNPEAISQLVHRH
VPNATLESHAGAELSFILPKESTHRFEGLFAKLEKKQKELGIASFGASVTTMEEVFLRVG
KLVDTSMDIQAIQLPALQYQHERRASDWAVDSNLCGMMDPTNGIGGLMEEDHTMVKLNTG
LPLHCQQLGAMFLKKAAYSWREWKMLAAQVVVPLTCITLALLAISYSTELFDDPLLRLSL
GEYGRTVVPFSVSSTSHLDQQLSELLRDMLQAEGQEPREVLGDLEEFLVFRASVEGGGFN
ERCLVATSFRDEGGQMVVTALFNNQAYHSPATALAIVDNLLFKLLCGPRASIEVSNYPQP
RNALQVAKDQFSEGRKGFDIALNLLFAMAFLASTFSVLAVSERAVQAKHVQFVSGAHVAT
FWLSALLWDLLSFLLPALLLLVVFRAFDVRAFTRDGHMADLLLLLLLYGWAIIPFMYLMS
FFFSSASTAYTRLTIFNILSGIVTFIVVTIMRIPAVKLEELSRTLDHVFLVLPNHCLGMA
VSSFYENYETRQYCTSSEVASHYCKKYNIQYQENFYAWNTPGVGRFVTSMAASGCAYLSL
LFLIETNLLWRLRTFICAFQRRWTLAELHSRTSVLPEDQDVADERSRVLAPSLESHTPLI
IKEISKVYDQRAPLLAVDRISLAVQKGECFGLLGFNGAGKTTTFKMLTGEETITSGDAFV
GGYSISSDIQQVRQRMGYCPQFDALLDHMTGREMLVMYARLRGIPERLIGPCVENTLRGL
LLEPHANKLVRTYSGGNKRKLSTGIALIGEPAVIFLDEPSTGMDPVARRLLWDTVARARE
SGKAIVITSHSMEECEALCTRLAIMVQGQFKCLGSPQHLKSKFGSGYSLQAKVHSEGQQE
ALEEFKAFVDLTFPGSVLEDEHQGMVHYHLPGQDLSWAKVFGILEKAKEKYGVDDYSVSQ
ISLEQVFLSFAHLQPPTVEEGR
NT seq
5109 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtgctgcggcagctggccctcctgctctggaagaactatactctgaagaagcgg
aaggttctggtgacaatcctggagctcctcctgcccctgttgttttctgggatcctgatt
tggcttcgcttgaagattcagtcagaaaatgtgcccaacgctactgtctaccccagccag
tccatccagcagctgccttttttcttcactttagccccatcagtgggcacctgggaactt
gcctatgtcccttcccacagcgaagctgccagaacagtcactgagacagtgaagagggca
ctgcaggtcaacataagagtacgaggctttccctctgagaaggacttcgaggactacatt
cggtatgacaaccactcctccaacgtgctggccgcagtggtgtttgagcatgtcttcaac
cacagcaaggacccgctgccactggcggtgaaataccacctacgcttcagttgtgcacga
agaaattacatatggacccaaacaggcaactttttcctgaaagaaacagatggctggcac
accaattccctttttccacttttcccaaacccaggaccaagggaacccacatcccctgat
ggtggggaacctgggtacattcgtgaaggcttcctggtggtgcagcatgctgtggacaaa
gccatcatgcactaccatgccaatgcctccacacagcagctcttccagaaactcacggtg
aaggcaaagaggttccctttcccaccattcatctcagaccccttccttatcgccatccag
taccagcttcccctgctactcatgctgagcttcacctacacttccctcaccatcatccgg
tccgtggtgcaggagaaagagagaaaactaaaggagtacatgcacatgatggggctcagc
agctggctgcactggaccgcatggctcctcatgttcttcttcttcctcctcatcgcagtc
tccttcatgacccttctcctgtgcatcaaggtgaaaaaggacatagcagtgctctcaagc
agtgacccttctctggtgctggtcttcctactgtgctttgccatctcctccatctccttc
agcttcatggtcagcaccttcttcaataaagccaacatcgcggcggccgtgggaggcttc
ctctacttcttcacctatatcccttacttcttcgtggctccacactacaactggatgacg
ttgagccagaagctcctgtcgtgtcttctgtccaatgttgccatggcgatgggagcccag
ctcataggaaaatttgaagccaaaggcacaggcatccagtggcgagacctcctgagtcct
gtcaacgtggatgatgacttctgcttcgggcaagtgctggggatgctactgctggactcc
gtgctctacggcctggtgacctggtatgtggaggctgtcttccctggccagttcggtgtg
ccgcagccctggtacttcttcctcatgccctcctactggtgcgggagcccaagaacagtg
gttggaaaagaggaagaggacagtgaccctgagaaagctctcagaacggagtactttgaa
gcagagccagaagacctggtagccgggctcaagatcaagcatctgtccaaggtgttccga
gtgggaaataaggacaaggcagctgtcagagacctgaacttgaacctgtacgagggccag
atcactgtcctgctgggccacaatggtgcagggaagactaccaccctttctgttctcaca
ggtctctatcctcctaccagtgggcgtgtgtacatcagtggatatgaaatctcccaagac
atggctctgatccggaagagcttgggcctgtgcccccagcatgatgtcctgtttgacaac
ctgacagtagcagaacatctctacttctatgcgcagctgaaaggcctgtcaccccaaaag
tgtcctgaagaagtgaagcacatgctatacgccctcagtatggaggacaagcggagcttg
aggtgcaagtacctgagtggaggaatgaagcgcaagctctccatcggcattgccctcata
gcgggttccaagttgttgattctggacgagcccacctcgggcatggacgccatctccagg
agggccatctgggaccttcttcagcagcagaagagtgaccgcaccatcctgctgaccacg
cacttcatggacgaggctgacctgctgggggaccgcatcgccatcatggcagatggggag
ctgcagtgctgtgggtcgtctctgttcctcaagcagaaatatggtgctggctaccatatg
accctagtgaaagaaccacactgtaatcctgaagccatctcccagctggtgcaccgccat
gtccccaacgccacactggagagccatgctggggctgagctgtcctttattcttcctaag
gagagcacacacagatttgaaggtctttttgccaaactggagaagaagcagaaggaattg
ggcattgccagctttggggcttcagttaccactatggaagaggttttcctccgggttggc
aagctagtggacaccagcatggacatccaagccatccagctccctgccctgcagtaccaa
cacgagaggcgggcaagcgactgggcggtagacagcaacctgtgtgggatgatggacccc
acgaatggcatcggtggcctcatggaggaggaccacaccatggtcaagctcaacaccggg
cttcccctccactgccagcagctgggggccatgttcctgaagaaggctgcgtacagctgg
cgagagtggaagatgctggcagcccaggtcgttgtccccctgacctgcatcaccctggcc
ctcctggccatcagctactccaccgagctcttcgacgacccgctcctgaggctgagtctg
ggcgagtacggcagaaccgtggtgcccttctcagtctctagcacctctcacttggatcag
caactgtcggagctcctgagagacatgctacaggctgagggccaggagccccgcgaggtg
ctgggtgacctggaagagttcctggttttccgagcctcggtggagggaggtggttttaat
gagcggtgcctggtggcgacgtccttcagagacgagggaggacagatggtggtcaccgcc
ttattcaacaaccaggcgtaccactctccagccaccgccctggccatcgtggacaacctt
ctgttcaagctgctgtgcggccctcgcgcctccattgaggtctccaactatccccagccc
cggaatgccctgcaggttgccaaggaccaattcagcgagggccggaaaggatttgacatc
gccctcaacttgctcttcgccatggcatttctggccagcacgttttctgtcctagcagtc
agcgagagggccgtccaggccaagcacgtccagtttgtgagcggcgcccatgtggcgact
ttctggctctctgctctgctgtgggacctcctctccttcctcctccccgccttgctgctg
ctggtggtgtttcgagcttttgacgtgcgtgccttcacacgggacggccacatggccgat
ctcctgctgctgctgctcctgtatggctgggccatcatccccttcatgtacctcatgagt
ttcttcttctcgagcgcatccacagcctacaccaggctgaccatattcaacatcctgtcg
ggcatcgtcaccttcatcgtggtcactatcatgcgcatcccagcggtaaagttggaagaa
ctttccagaaccctggatcatgtgttcctggtgctacccaaccactgtttggggatggca
gtcagcagcttctatgagaactatgaaacccgccagtactgcacctcctcagaagttgcc
tcccactactgcaagaagtacaacatccagtaccaggaaaacttctacgcgtggaacacg
ccgggggtgggcaggtttgtgacctccatggctgcctcggggtgtgcctacctcagcctg
ctcttcctcatcgagaccaacctgctatggagactgaggacctttatctgtgcctttcag
aggaggtggacactggcagaattgcatagccggacttcagtgcttcctgaagaccaagat
gtggcagatgagaggagccgagtcctggcccccagcctggaatcccacacgcccctgatc
atcaaggagatttctaaggtatatgaccagcgggcgccgctcctcgctgtggacaggatc
tcccttgccgttcagaagggggagtgctttggccttctgggtttcaatggagctgggaag
actaccacattcaaaatgctcacaggggaggagaccatcacctcaggggacgcctttgtt
ggaggctacagcatcagctctgacatccagcaggtgcggcagcggatgggctactgcccc
cagtttgatgccctgctggaccacatgactggccgggagatgctggtcatgtatgcacgg
ctccggggcattcctgagcgcctcatcggcccctgtgtggagaacacactgcggggcttg
ctcctggagccacatgctaacaaactggtcaggacatacagcggtggcaacaagcgaaag
ctgagcacaggcatcgccctcattggagagcctgcagtcatcttcctggatgagccgtcc
actggcatggaccccgtggccagacgcttgctgtgggacacagtggcccgggcccgggag
tctggcaaggccattgtcatcacctcccacagcatggaggagtgtgaggcgctgtgcacc
cggctggccatcatggtgcagggccagttcaagtgtctgggcagcccgcagcacctcaag
agcaagtttggcagcggctactccctgcaggccaaggtccacagcgaagggcagcaggag
gctctggaggagttcaaggcgttcgtggacctgaccttcccaggcagcgtcctggaagat
gagcaccagggtatggtccattaccacctaccgggccaagacctcagctgggcaaaggtt
tttggtatcctggagaaagccaaggaaaagtacggagtggatgactactcagtaagccag
atctctctggagcaggtcttcctgagctttgcccacctgcagcccccgactgtggaggag
gggcgatga
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integrated database retrieval system
