Dipodomys spectabilis (banner-tailed kangaroo rat): 122124337
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Entry
122124337 CDS
T07891
Symbol
Nup107
Name
(RefSeq) nuclear pore complex protein Nup107 isoform X1
KO
K14301
nuclear pore complex protein Nup107
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp03013
Nucleocytoplasmic transport
dsp05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122124337 (Nup107)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
122124337 (Nup107)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dsp03019
]
122124337 (Nup107)
03036 Chromosome and associated proteins [BR:
dsp03036
]
122124337 (Nup107)
Messenger RNA biogenesis [BR:
dsp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
122124337 (Nup107)
Chromosome and associated proteins [BR:
dsp03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
122124337 (Nup107)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup84_Nup100
Phage_int_M
DUF2310
HisK_sensor
Motif
Other DBs
NCBI-GeneID:
122124337
NCBI-ProteinID:
XP_042554992
LinkDB
All DBs
Position
Unknown
AA seq
937 aa
AA seq
DB search
MDRSGFGEMSSPVIREAEVTRTARKQSAHKRVLIRASQDENFGNITPRSQIIPRTPSSFR
QLSTPLNRSLQRHPDISCILGTGGRSPRLTQSSGFLGNLSMVTNLDDSNWAAAFSSQRLG
LFTNMEAHNITEDVNLSAVMLREDDPGEAASMSMFSDFLQSFLKHSSTTVFDLVEEYENI
CCSQVNILSKIVSRAAPGLQKFSITASMLWLLQQEMVTWRLLASLYRDRIQSSLEDENMF
AVTAVNASEKTVVEALFQRDSLVRQSQLVVDWLESIAKDEIGDFSDNIEFYAKSVYWENT
LHTLKQRQLPSYIGSVRPLVTELDPDAPIRQKMPLDDLDREDEVRLLKYLFTLIRAGMTE
EAQRLCKRCGQAWRAATLEGWKLYHDPNVNGGTELETVEGNPYRRIWKISCWRMAEEELF
NRYERAIYAALSGNLKQLLPVCDTWEDTVWAYFRVMVDSLVEQEIRTSVMTLEETEELPR
EYLEANWTLEKVFEELQATDKTRVLEENQEHYHIVQKYLILGDIDGKILYLILGDIDGLM
DEFSKWLSKTRSNLPGHLLRFMTHLILFFRTLGLQTKEEVSIEVLKTYIQLLVNEKHTNL
IAFYTCHLPQDLAVAQYALFLEGVTEYEQRHHCLELAKEADLDVATITKTVVENIRKKDN
GEFSHHDLAPALDTGTTEEDRLKIDVIDWLVFDPAQRAEALKQGNAIMRKFLASKKHEAA
KEVFVKIPQDSIAEIYNQWEEQGMESPLPAEDDNAIREHLCIRAYLEAHETFNEWFKHMN
SAPQKPTVISQPSFTEKVAFEHKEKKYEMDYGIWKGHLDALTADVKEKMYNVLLFVDGGW
MVDVREDAEEDHERTHQMVLLRKLCLPMMCFLLHTILHSTGQYQECLQLADMVSSERHKL
YLVFSKEELKKLLQKLRESSLMLLDQGLDPLGYEIQS
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atggacaggagcggctttggagagatgtcatcccctgtgatccgggaggcagaggtgaca
cggacggcacgaaagcagagtgctcataaaagagttttaattcgagcttcccaagatgaa
aattttggtaatattacaccaagaagccagatcattcctcgaactcccagctcatttcga
cagctttctactccactgaaccgaagcttacaacggcatccagacatttcctgcattctt
ggaacaggaggaaggtctccccgccttacacagtcttctgggtttttgggcaatctgtcc
atggtaactaatctggatgacagcaattgggcagctgcattctcatcacagcggctaggg
ctcttcacaaacatggaagcccacaacataacggaggacgtaaatctcagtgctgttatg
ttacgtgaagatgaccctggagaagctgcatccatgagcatgttttctgacttcctgcag
tcctttttgaagcactcttcaactacagtttttgaccttgtagaagagtatgaaaatatt
tgttgtagtcaggtgaatatattgagtaaaatagtaagccgagcagctcctggactgcag
aagttttcaataacagccagtatgctctggcttcttcaacaggagatggtcacatggagg
ctgctagcttctttgtatagagatagaatacagtcttccttagaagatgaaaatatgttt
gcagttactgctgttaacgccagtgagaaaacagttgtggaagcattgtttcagagagat
tcccttgtgcgacaaagtcagctggtggtggattggttggagagtattgccaaagatgaa
attggagatttttctgataatattgaattttatgcaaaatcagtatattgggaaaatact
ctccataccttaaaacaacgacagctgccttcttatataggaagtgttcgtcctcttgtc
actgaattagatcctgatgctcccattagacagaaaatgccacttgatgatctggacaga
gaagatgaagttagattactcaaatatctttttactcttatccgtgctggaatgacagaa
gaggctcaacggctttgtaagcgttgtggtcaagcatggagagctgcaacactagaaggc
tggaaactctatcatgaccctaatgttaatggaggaacagaattagaaactgttgaagga
aatccatatagacgcatttggaaaattagttgttggagaatggcagaagaggagcttttt
aatagatatgaaagagcaatttatgcagctttaagtgggaatctgaagcagcttcttcct
gtctgtgacacctgggaagacacagtctgggcatacttccgggtgatggtggacagtctg
gtggaacaggagatccggacgtcagtaatgactctggaggaaactgaagaacttcctagg
gaatatttagaagcaaattggaccttagaaaaagtttttgaagaacttcaagctacagat
aaaacgagagtcctagaagaaaatcaagaacattatcatatagttcagaaataccttatc
ctgggagatattgatggtaagatattataccttatcctgggagatattgatggtttgatg
gatgagtttagcaaatggctttccaaaaccagaagcaatctacctggacacctccttcgc
ttcatgactcacctcattttatttttccgcacactgggactgcagaccaaagaagaagtt
tccattgaagttttaaagacatatatacagcttttagtaaatgaaaagcacacaaatcta
atagcattttatacctgccatttgcctcaagaccttgctgttgcccagtatgcattattc
ttggaaggtgttacagagtatgaacagcgccaccattgcctggagctggctaaggaagca
gatttggatgttgcaacaataacgaaaacagtagttgagaatattcgaaagaaagacaat
ggtgaatttagtcatcatgacctggccccagccctagatactggcactactgaggaggat
cggttgaagattgatgtaattgactggttggtatttgaccctgcacagagggctgaagca
ctgaaacaaggcaatgccataatgagaaaattcttagcatcaaaaaagcatgaagctgcc
aaagaagtatttgtgaaaattcctcaggattccatagcagaaatctataatcagtgggag
gaacaaggaatggaaagtccacttcctgctgaagatgataatgctatcagagaacatttg
tgcattagagcttatttggaagcccatgaaacctttaatgagtggtttaagcatatgaac
tcagctccacaaaaacctactgtgatttctcaaccaagttttactgagaaagtggctttt
gaacacaaagaaaagaaatatgaaatggattatggtatttggaaagggcacttggatgcc
ctgactgctgatgtgaaagagaaaatgtacaacgtcttgctgtttgttgatggagggtgg
atggtagatgtcagagaggatgctgaagaagaccatgagagaacgcatcagatggtttta
ctaaggaaactttgtctaccaatgatgtgttttctgctgcacaccatattgcacagcact
ggtcagtatcaggagtgcctgcagttagcagatatggtgtcctctgagcgtcacaaactc
tatctggtattttctaaggaagaactaaagaaattgcttcagaagttaagggaatcctct
ctcatgcttcttgaccagggacttgatccattaggatatgaaattcaatcataa
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