Dipodomys spectabilis (banner-tailed kangaroo rat): 122124599
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Entry
122124599 CDS
T07891
Symbol
Ctcfl
Name
(RefSeq) transcriptional repressor CTCFL
KO
K23195
transcriptional repressor CTCF
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dsp03000
]
122124599 (Ctcfl)
03036 Chromosome and associated proteins [BR:
dsp03036
]
122124599 (Ctcfl)
Transcription factors [BR:
dsp03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
122124599 (Ctcfl)
Chromosome and associated proteins [BR:
dsp03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
122124599 (Ctcfl)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-H2C2_5
zf-C2H2_16
zf-C2H2_jaz
zf-C2H2_15
zf-C2H2_REST
zf-C2HE
zf-C2H2_7th_ZNF462
Zf-C2H2_ZNF451_C
zf-Di19
zf-C2H2_ZNF462_1st
C2CH-3rd_BIRD-IDD
Peptidase_A17
Motif
Other DBs
NCBI-GeneID:
122124599
NCBI-ProteinID:
XP_042555195
LinkDB
All DBs
Position
Unknown
AA seq
618 aa
AA seq
DB search
MAAPEAWGRPEPLGRLRPRQAAPGKAGVQAGRRDGGRRSGSGPAPAGAPHAELEPPSAGE
RFALPGQAAPVGLPGAEAALLWLGPPVPGAPPCLALGAPEPPCPPGGLEVAELYLLEGTP
ALVLGVDAPEAAAGRQAEGAAFTELEEGQQQPPEGGLAASTQEQFFLLQVRPGDEGKDEM
ILTISNLKVEAQPERLTTGLANVEKPTARNSQRETVDTKCAFRCSVCPFATSGISSLNRH
MKTHTSGKAHECHLCQKAFRTVTLLRNHVNTHTGTKPYKCVECSAAFVTSGELVRHRRYR
HTHEKPFRCSLCQYASVEASKLTRHIRSHTGERPFQCHLCSYASKDAYKLKRHLRTHSGE
KPYECHVCHARFTQSGTMKMHVAQKHSENAPRHQCPRCATLIARKSDLRVHLRNLHGYST
TELTCRHCPATFHERYALLQHQRSHKNEKPFVCQHCGYACKQERHLAAHMRIHTGEKPFA
CPACGRCFRQTQLLSVHVKKYHDPSFVPTAHQCPGCGKGSPAGPRKQAGVSQLRKRRGWL
QTSSTLLLSTRHNMHRHAEQCGLAPEHPGLSGEGCAGKNAPADPGPTGCRDDGAAGESRP
MRAEPEAVQRVESSSMAT
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggcggcccccgaggcctggggccggcccgagcccctcggccgcctccgcccgcgccag
gcggcgccggggaaggccggggtgcaggccgggcgcagagacggggggcgccggagcggc
tcggggccggccccggccggcgccccgcacgccgagctggagccgccctcggcgggcgag
cggttcgccctcccggggcaggccgcgcccgtcgggctgccgggcgccgaggccgcgctg
ctgtggctcgggccgcccgtgcccggcgcgccgccgtgcctggccctgggcgcgcccgag
ccgccgtgcccgccgggcggcctggaggtggccgagctgtacctgctggaggggaccccg
gccctggtcctgggcgtcgacgcccccgaggcagcagcgggccgccaggcagaaggcgcg
gcgttcaccgagcttgaggaaggtcagcagcagccacctgaaggaggactggccgccagc
actcaggagcagttcttcctcttgcaagtgaggcccggggatgaaggaaaagatgaaatg
attctgacaatttccaacttaaaagttgaagcacagccagagagactgaccaccggtcta
gccaatgtggaaaagcccacagccaggaacagccagagggagacagtggacacaaaatgc
gccttccgctgcagcgtctgcccattcgccacctcggggatctcgagtctgaaccgccac
atgaaaacgcacaccagcgggaaggcacacgagtgccacctctgccagaaggcgttccgc
accgtcacgctcctacgcaaccacgtcaacacgcacacaggaaccaagccctacaagtgt
gtggagtgcagtgcggcgtttgtgaccagcggggagctggtgcgtcaccggcgctacaga
cacacccacgagaagcccttccgctgctcgctctgccagtatgccagcgtggaggccagc
aagctgacccgccacatccgctcgcacacgggcgagcgccccttccagtgccacctgtgc
agctacgccagcaaggacgcgtacaagctgaagcgccacctgcgcacccactcaggagag
aagccgtacgagtgccatgtctgccacgcccgcttcacccagagcggcaccatgaagatg
cacgtggctcagaagcacagtgagaatgcgcccagacaccagtgcccccgctgcgccacc
ctcatcgccaggaagagcgacctgcgtgtgcacctgcgcaacctgcacggctacagcacc
acggagctcacgtgccgccactgccccgccaccttccacgagcgctacgccctcctgcag
caccagcggagccacaagaacgagaagccgttcgtgtgccagcactgcggctacgcctgc
aagcaggagcggcacctggcagcccacatgcgcatccatacgggagagaagcccttcgcc
tgcccggcctgcggcagatgcttccggcagacccagctgctcagtgtgcacgtgaagaag
taccacgatcccagcttcgtccccaccgcccaccagtgccccgggtgtggcaaaggctct
cccgcaggaccacgaaagcaagctggtgtttcacagctgcgcaaacgccggggttggctc
cagacgtcctccacgctcctgctgtccacacggcataacatgcaccgccacgcggagcag
tgtggcctggcaccggagcaccccggcctctcgggcgagggttgcgcggggaagaacgcg
ccggcggaccccggacccacgggctgcagggatgatggcgctgccggggagagccgcccc
atgcgggcggagccggaggcggtgcagcgagttgagagcagcagcatggccacgtga
DBGET
integrated database retrieval system
