Dipodomys spectabilis (banner-tailed kangaroo rat): 122124676
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Entry
122124676 CDS
T07891
Name
(RefSeq) tripartite motif-containing protein 43-like
KO
K12019
tripartite motif-containing protein 43/48/49/64/77
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dsp04121
]
122124676
Ubiquitin system [BR:
dsp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
122124676
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C3HC4
SPRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4_2
zf-RING_6
zf-RING_2
zf-C3HC4_3
zf-RING_5
DUF5685
Baculo_IE-1
Jas_motif
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
122124676
NCBI-ProteinID:
XP_042555307
LinkDB
All DBs
Position
Unknown
AA seq
397 aa
AA seq
DB search
MRTQAFQKELRCAICINTFIEPVTLECGHSFCRPCLCLSWEETQIPARCPVCRGPCQQRD
LKTNVVLRSLVAIARRASLRHFLSSEEYMCGTHRETKQMFCEVDRALLCRSCSQSQEHRA
HKHHPIDRAAEEQREMISKQMHAVWEKTQQNQHNLQEKRRLINRWIWYVKLFRGITKDVF
RNMYQELIKTYQKPDVELLQDVELILESCESVLFFLPLPLRPELSAPPIPGLIERLTQHR
VEIAFNDATENHDLGCCVGQDNPYAVLSSEESFHFTAFGHQVFSSGKHYWEVSVDDSSTW
ALGVIRDFSIGSNLTESEDLFLLLFVKENTLSTIFTTSPLLPHYVEKPLGRVGVFLDLDD
GSESFWNVAKSSLIWRYPTGAVQFPVRPHFFSGSLVS
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgagaactcaggccttccagaaggaattgagatgtgccatctgtataaatacttttata
gagccagtcaccttagagtgcgggcacagtttttgtcgaccttgtctctgcctcagctgg
gaagagacccagattccagccaggtgccctgtgtgcaggggaccctgccagcagagagac
ctcaaaaccaacgtggttctgaggagcctggtggccattgccagaagagccagcctcagg
cattttctgagctctgaggaatacatgtgtgggacacacagggagacaaagcagatgttc
tgtgaggtagacagggccctgctctgtaggagctgctcccagtctcaggagcacagggct
cacaaacaccatcccatagatagggctgctgaggagcagagggagatgatttcaaagcag
atgcatgctgtatgggaaaagactcaacaaaaccagcacaatttacaggagaagaggaga
ctcatcaaccgatggatttggtatgtgaagctattccgaggcataactaaggatgttttt
agaaatatgtatcaggagctgatcaaaacataccagaagccagatgtggaactgcttcag
gatgtagagttgatcctagaaagctgtgagtcagtcttgttcttcctgcctcttcctctg
aggccagagctcagtgcccctcccattcctggactgatagagaggctcacccagcaccgg
gtggagattgccttcaatgatgctacagagaatcacgatcttgggtgttgtgttggacag
gacaatccctatgcagttttgagttctgaagagtccttccactttactgcttttggacac
caagtcttcagctctgggaaacattactgggaggttagtgtggatgactcttccacctgg
gccctgggagttattagggatttctccatagggagcaacctcactgaatctgaggatctt
ttcctccttttgtttgtgaaagagaacacactttccaccatttttaccacatccccactg
ctgcctcactatgtagagaagcctctgggccgggttggtgtgtttcttgatcttgacgat
ggcagtgagagtttttggaatgtggctaagagttcccttatctggagataccccactggt
gctgtccaatttcctgtcaggccccattttttcagtggtagcctggtgtcctaa
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