Dipodomys spectabilis (banner-tailed kangaroo rat): 122124684
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Entry
122124684 CDS
T07891
Symbol
Vldlr
Name
(RefSeq) very low-density lipoprotein receptor isoform X1
KO
K20053
very low-density lipoprotein receptor
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp05017
Spinocerebellar ataxia
dsp05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
122124684 (Vldlr)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
122124684 (Vldlr)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dsp04131
]
122124684 (Vldlr)
Membrane trafficking [BR:
dsp04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
122124684 (Vldlr)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
EGF_LRP2
EGF
SGL
hEGF
Motif
Other DBs
NCBI-GeneID:
122124684
NCBI-ProteinID:
XP_042555319
LinkDB
All DBs
Position
Unknown
AA seq
845 aa
AA seq
DB search
MGTSARWALWLLLALCWAPGDSGATATGRKANCDPSQFQCMNGRCITLLWKCDGDEDCTD
GSDERNCVKKTCAESDFVCNNGQCVPNRWQCDGDPDCEDGSDENPEQCHMRTCRINEISC
GARSTQCIPVSWRCDGENDCDSGEDEENCGNITCNPLEFTCSSGRCISKNFVCNGQDDCN
DGSDELDCAPPTCGAHEFQCSTSSCIPISWVCDDDADCSDQSDESLEQCGRQPVIHTKCP
ASEIQCGSGECIHKKWRCDGDPDCKDGSDEVNCPSRTCRPDQFECEDGSCIHGSRQCNGI
RDCVDGSDEVNCKNVNQCLGPGKFKCRSGECIDILKVCNQEQDCRDWSDEPLKECHVNEC
SINNGGCSHICKDLVIGYECDCAAGFELIDKKTCGDIDECQNPGICSQICINLKGGYKCE
CSRGYQMDLATGVCKAVGKEPSLIFTNRRDIRKIGLERKEYIQLVEQLRNTVALDADIAA
QKLFWADLSQKAIFSASIDDKVGRHVKMIDNVYNPAAIAVDWVYKTIYWTDAASKTISVA
TLDGTKRKYLFNSDLREPASIAVDPLSGFVYWSDWGEPAKIEKAGMNGFDRRPLVTLDIQ
WPNGITLDLIKSRLYWLDSKLHMLSSVDLNGQDRRIVLKSLEFLAHPLALTIFEDRVYWI
DGENEAVYGANKFTGSELATLVNNLNDAQDIIVYHELVQPSGKNWCEEDMENGGCEYLCL
PAPQINDHSPKYTCSCPNGYNLEENGRECQRINVTTAVSEVSVPPKGSSAAWAILPLLLL
VMAAVGGYLMWRNWQHKNMKSMNFDNPVYLKTTEEDLSIDIGRHSASVGHTYPAISVVST
DDDLA
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atgggcacgtccgcgcgctgggcgctctggctgctgctcgcgctgtgctgggcgcccggg
gacagcggggccaccgccaccgggagaaaagccaactgtgatccctcccaattccagtgc
atgaatggccgctgtattactctgctgtggaaatgcgatggggatgaggactgtacagac
ggcagcgatgaaaggaactgtgtaaagaagacgtgtgcggagtctgacttcgtttgcaac
aatgggcaatgtgttccgaatcgatggcagtgtgacggtgatcctgactgtgaagatggt
tctgatgaaaacccagaacagtgccatatgagaacatgccgcataaatgaaatcagctgt
ggcgcccgttctactcagtgtatcccagtgtcctggagatgcgatggtgaaaatgattgt
gacagtggagaagatgaagaaaactgtggcaacatcacgtgtaaccctctggagttcact
tgctccagtggccgctgcatctccaagaacttcgtgtgcaatggccaggatgactgcaat
gatggcagcgacgagctcgactgtgcccccccgacctgcggcgcccacgagttccagtgc
agtacttcctcctgcatccccatcagctgggtatgtgacgatgatgcggactgctcagac
cagtcagatgagtccctggaacagtgtggccgccagcccgtgatacacaccaagtgccca
gccagcgaaatccagtgtggctctggcgagtgcatccacaagaaatggcgatgcgatggg
gacccagactgcaaggatggtagcgatgaggtcaactgcccttcccgaacctgccggccg
gatcaatttgaatgcgaggatggtagctgcatccatgggagcagacagtgtaatggcatc
cgagattgcgtcgatggttctgatgaagtcaactgcaaaaatgtcaatcagtgcttgggc
cctggaaagttcaaatgcagaagtggagaatgtatagatatcctcaaagtatgtaaccag
gagcaagactgcagagactggagtgatgagcccctcaaagaatgtcacgtcaatgaatgc
tcaataaataacggtggatgctctcatatctgcaaagacctagtgataggctatgaatgc
gactgcgcagctgggtttgaactgatagataagaaaacctgtggagatattgacgaatgc
caaaatccaggaatctgcagccaaatttgtatcaacttaaaaggcggttacaagtgtgaa
tgtagtcgtggctatcaaatggatcttgccactggcgtgtgcaaagcagtaggtaaagag
ccaagtctgatcttcaccaatcgaagagatatcaggaagattggcttagaaaggaaagag
tatatccaactagttgaacagctacggaacactgtggctcttgatgctgacattgctgca
cagaaactattctgggctgatctaagtcaaaaggccatcttcagcgcctcaattgatgac
aaggttggtagacatgttaaaatgatcgacaatgtctataatcctgcagccattgctgtt
gattgggtgtacaagaccatctactggactgatgcagcttctaagactatttcagttgct
accctagatggaaccaagaggaagtacctgtttaactctgacttgagagagcccgcctcc
atagctgtggacccgctgtctggctttgtttactggtcagactggggtgaaccagctaaa
atagaaaaagcagggatgaatggatttgatagacgtccactggtaaccttggatatccaa
tggcctaatggaattacacttgatcttataaaaagccggctttattggcttgattccaag
ttgcacatgctctccagtgtggacttgaatggccaagatcggaggatagtactaaaatcc
ctggagtttctggctcatcctcttgcattaacaatatttgaggatcgtgtctactggata
gatggggaaaatgaagctgtgtatggcgccaataaattcactggatctgaactggctact
ctagtcaacaatctcaatgatgcacaagacatcattgtttatcatgaacttgtacaacca
tcaggtaaaaattggtgtgaagaagacatggagaatggaggatgcgaatacctctgcctg
ccagcaccacagattaatgatcactctccaaaatatacctgttcctgtcccaatgggtac
aatctagaagaaaatgggagagagtgccaaagaatcaacgtaaccacagcagtctcagaa
gttagtgttcccccaaaagggtcttctgcagcctgggccatcctgcctctgttgctgtta
gtgatggcggcagtaggtggctacctgatgtggcgaaactggcaacacaagaacatgaaa
agcatgaactttgacaatcctgtgtacttgaagacaaccgaagaggacctctccatagac
attggtagacacagtgcttctgtaggacacacatacccagcaatatcagttgtcagcaca
gatgatgatctagcttga
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integrated database retrieval system
