Dipodomys spectabilis (banner-tailed kangaroo rat): 122124983
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Entry
122124983 CDS
T07891
Symbol
Ss18l1
Name
(RefSeq) calcium-responsive transactivator isoform X1
KO
K15623
protein SSXT
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp03082
ATP-dependent chromatin remodeling
dsp05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
122124983 (Ss18l1)
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
122124983 (Ss18l1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dsp03036
]
122124983 (Ss18l1)
Chromosome and associated proteins [BR:
dsp03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
122124983 (Ss18l1)
GBAF(ncBAF) complex
122124983 (Ss18l1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
122124983
NCBI-ProteinID:
XP_042555456
LinkDB
All DBs
Position
Unknown
AA seq
403 aa
AA seq
DB search
MSVAFASARPRGKGEVTQQTIQKMLDENHHLIQCILDHQSKGKTAECAQYQQLLHRNLVY
LATIADSSQNMQSLLPAPPTQNMNLGPGALSQSGSGQSLHSQGSLSDAISTGLPPASLMQ
GQMGNAGPNHVSMQQTAQSTLPTTSVSMSGSSHGTGPGYSHSGPASQSVPMQGQGAIGNY
VSRTNINMQSNPVPMMHQQAATSHYNSAQGSSQHYQGQSSIAMMGQGGQGSSMMGQRPMA
PYRPSQQGSSQQYLGQEEYYSEQYSHGQGAAEPMTQQYYPDGHGDYAYQQSSYTEQSYDR
AFEESTQHYYEGGNSQYSQQQAGYQQGSAQPQTYPQQQYANQQSYPGQQQGYGPAQGAPS
QYSSYQQGQGQQYGSYRASQTGPSAQQQRPYGYEQGQYGNYQQ
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtggccttcgcgtccgcgcggccgaggggcaaaggggaagtcacgcagcagacc
atccagaagatgctggacgaaaaccaccacctgatccagtgtatcctggaccaccagagc
aagggcaaaacagccgagtgtgcccagtaccagcagctcctgcatcgaaacctggtgtac
ctggccacaatcgcggactccagccagaacatgcagtctctgcttccggcgcctccgacc
cagaacatgaacctgggccccggcgccctgagtcagagtggatccggccagagcctgcac
tcgcagggcagcctcagcgatgccatcagcacgggcctgcccccggcctcgctcatgcag
ggccagatgggcaacgcaggcccgaaccacgtgtccatgcagcagactgcgcagagcacg
ctgcctaccacttctgtgagcatgtcaggcagcagccacggaaccgggcccggctacagc
cactcgggccccgcctcgcagagcgtccccatgcagggccagggtgccattggcaactat
gtgtctcggaccaacatcaacatgcagtccaacccagtgcccatgatgcaccagcaggct
gccacgtcccactacaactcggcgcagggcagtagccagcactaccagggccagtcctcc
atcgccatgatgggtcagggcggccaggggagcagcatgatggggcagcggcccatggcg
ccctaccggccttcccagcaaggctcttcccagcagtacctgggccaggaagagtactac
agcgagcagtacagccacggccagggcgccgctgagcccatgacccagcagtactacccc
gatggccacggcgactacgcctaccagcagtcatcttacacggagcagagctacgaccgc
gccttcgaggagtccacgcagcactactacgagggcggcaactcgcagtacagccagcag
caggccggctaccagcagggctcggcgcagccgcagacatacccccagcagcagtacgcc
aaccagcagagctaccccgggcagcagcaaggctatgggcctgctcagggcgccccctcg
cagtactccagctaccagcaaggacaaggccagcagtatgggagctacagagcctcacag
acgggaccctctgcccagcagcagcggccttacggctatgaacagggccagtatggaaac
taccagcaataa
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