Dipodomys spectabilis (banner-tailed kangaroo rat): 122125004
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Entry
122125004 CDS
T07891
Symbol
Col9a3
Name
(RefSeq) collagen alpha-3(IX) chain
KO
K08131
collagen type IX alpha
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp04151
PI3K-Akt signaling pathway
dsp04510
Focal adhesion
dsp04512
ECM-receptor interaction
dsp04820
Cytoskeleton in muscle cells
dsp04974
Protein digestion and absorption
dsp05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
122125004 (Col9a3)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
122125004 (Col9a3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
122125004 (Col9a3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
122125004 (Col9a3)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
122125004 (Col9a3)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
122125004 (Col9a3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
dsp00535
]
122125004 (Col9a3)
Proteoglycans [BR:
dsp00535
]
Extracellular matrix (ECM) proteoglycans
Others
122125004 (Col9a3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
122125004
NCBI-ProteinID:
XP_042555487
LinkDB
All DBs
Position
Unknown
AA seq
666 aa
AA seq
DB search
MWDCVMHSPGVVLALSLLPKCPVGWGDPLTLGEAGPPGLPGSPGPKGTPGKPGRPGEAGL
PGLPGVDGLTGRDGPPGPKGAPGERGSLGPPGPPGLGGKGLPGPPGEAGVSGLPGGIGLR
GPPGPSGPPGLPGPPGPPGPPGHPGVLPEGAGDLQCPAICPPGPPGPPGMPGFKGLTGYK
GDQGEVGKDGEKGDPGPPGPAGIPGTVGLQGPRGSRGLPGPLGPPGDRGPIGFRGPPGVP
GAPGKVGDRGERGPEGFRGPKGDLGRPGPKGLPGVAGPGGEPGMPGKDGRDGVPGLDGGK
GEAGRNGAPGEKGPNGLPGLPGRAGSKGEKGELGRAGELGEAGPSGEPGIPGDMGVPGQR
GEAGHRGSAGVLGPQGPPGAPGVRGFQGRKGSVGDPGLPGPQGLRGDVGDRGPGGASGAK
GDQGFAGADGLPGDKGELGPSGPMGQKGESGIRGELGPKGLQGPNGTGGVQGVPGPPGPL
GLQGLQGVPGPTGKAGVPGKEASEQRVRELCGGMISEQIAQLAAHLRKPLAPGAIGRPGP
AGPPGPQGPPGSTGHPGARGPPGYRGPTGELGDPGPRGSRGDRGDKGTAGAGQDGPAGDQ
GLQGPPGVPGTSKDGRDGAPGEPGLPGDSGLPGAVGAQGTPGICDTSACQGAVLGGGGEK
SGPRSS
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgtgggactgtgtgatgcattccccaggggttgtcttggccctcagcttgcttcccaag
tgccccgtgggctggggcgaccccctcaccctgggagaagctggccctccaggcctaccc
gggtcccccgggccaaaggggactccaggaaaaccaggaagaccaggagaggcgggcctg
cccggcctgcccggcgtggatggtctgacagggagagatggaccccctggacccaaaggt
gctcctggagagcggggcagtctgggacccccaggaccacctgggctgggaggcaaaggc
cttccaggaccccccggagaggcgggcgtgagcggccttcccggtgggattggcctgcga
ggccccccgggaccctctggacccccaggcctgcccggacccccaggccctcccggacct
cccggccaccctggggtcctcccggaaggcgccggtgacttgcagtgccctgccatctgc
ccacccggcccgcctgggcccccaggaatgccggggttcaaggggctgacaggctacaaa
ggggaccagggagaagttggcaaagacggagagaagggtgacccagggccccccggacct
gctggcatcccaggcactgtggggctacagggaccccgaggatcgcgaggactgcccggg
cccctcggaccccctggtgaccggggtcccattggtttccgagggccccccggggtccca
ggagcacctgggaaagtgggtgacagaggtgagcgaggcccagaaggtttccgtggcccc
aagggtgaccttggcagacctggtcccaaaggacttcccggcgtggccgggccgggcgga
gagccgggcatgccaggcaaggatggccgggacggcgtgccaggactggacggcgggaag
ggagaggccgggcgcaacggtgccccgggagagaagggtcccaacgggttgccgggcctt
cctggacgagcaggctccaaaggggagaagggcgagctgggcagagccggagagctgggt
gaagctggcccttccggagagccaggcatccccggggacatgggcgtgcccgggcagcga
ggcgaggctggccacaggggctccgcgggggtccttggcccacaaggccctccgggagcc
cctggcgtccgcggcttccagggccgcaagggcagtgtgggcgatcccggccttcctggc
ccccagggcctccgtggtgatgtgggtgaccggggccccggaggagcctcaggtgctaaa
ggagaccagggcttcgcaggtgctgacgggctccctggggacaaaggagagctgggtccc
agtggccccatgggacagaaaggagagtctggcattcggggggagctgggccccaaaggc
cttcaaggacccaatggcactggtggcgtgcagggagtccccggccccccggggcccctg
ggtttgcagggcctgcagggcgtccccggccccaccgggaaagccggcgttccgggcaag
gaggccagtgagcagcgggtccgggagctgtgcggaggcatgatcagcgagcaaatcgcg
cagctggctgcacacctgaggaagccgttagcacccggcgccatcggccggcccggcccc
gccggcccccccggcccccagggccccccgggctccaccggccaccctggcgctcggggg
ccccctgggtatcgtggtcccaccggggagctgggagaccctggacccagaggaagccga
ggcgaccgaggagacaagggcacggccggcgcggggcaggacggacccgcgggggaccag
gggctccaagggcccccaggtgtgccaggcaccagcaaagatggcagagacggcgctccg
ggggagccggggcttcctggggactctggccttccgggcgctgtcggggctcaaggcacg
ccaggaatctgcgacacttccgcttgccaaggcgccgtcctgggagggggcggggagaag
tccggtcctcggagctcctga
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