Dipodomys spectabilis (banner-tailed kangaroo rat): 122125131
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Entry
122125131 CDS
T07891
Symbol
Dctn1
Name
(RefSeq) dynactin subunit 1
KO
K04648
dynactin 1
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp04814
Motor proteins
dsp04962
Vasopressin-regulated water reabsorption
dsp05014
Amyotrophic lateral sclerosis
dsp05016
Huntington disease
dsp05022
Pathways of neurodegeneration - multiple diseases
dsp05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
122125131 (Dctn1)
09150 Organismal Systems
09155 Excretory system
04962 Vasopressin-regulated water reabsorption
122125131 (Dctn1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
122125131 (Dctn1)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
122125131 (Dctn1)
05016 Huntington disease
122125131 (Dctn1)
05022 Pathways of neurodegeneration - multiple diseases
122125131 (Dctn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dsp04131
]
122125131 (Dctn1)
03036 Chromosome and associated proteins [BR:
dsp03036
]
122125131 (Dctn1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
dsp04812
]
122125131 (Dctn1)
Membrane trafficking [BR:
dsp04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
122125131 (Dctn1)
Chromosome and associated proteins [BR:
dsp03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Dynactin complex
122125131 (Dctn1)
Cytoskeleton proteins [BR:
dsp04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dynactins
122125131 (Dctn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dynactin
CAP_GLY
Vps23_core
Motif
Other DBs
NCBI-GeneID:
122125131
NCBI-ProteinID:
XP_042555624
LinkDB
All DBs
Position
Unknown
AA seq
1239 aa
AA seq
DB search
MSAEASARPLRVGSRVEVIGKGHRGTVAYVGATLFATGKWVGVILDEAKGKNDGTVQGRK
YFTCDEGHGIFVRQSQIQVFEDGADTTSPETPDSSASKVLKREGADTAAKASKLPTRPAS
TGGPGASSSLGPSGSASAGELSSSEPSTPAQTPLAAPIIPTPALTSPGAAPPLPSPSKEE
EGLRAQVRDLEEKLETLRLKRAEDKAKLKELEKHKIQLEQVQEWKSKMQEQQADLQRRLK
EARKEAKEALEAKERYMEEMADTADAIEMATLDKEMAEERAESLQQEVEALKERVDELTT
DLEILKAEIEEKGSDGAASSYQLKQLEEQNARLKDALVRMRDLSSSEKQEHVKLQKLMEK
KNQELEVVRQQRERLQEELSQAESTIDELKEQVDAALGAEEMVEMLTDRNLNLEEKVREL
RETVGDLEAMNEMNDELQENARETELELREQLDMAGARVREAQKRVEAAQETVADYQQTI
KKYRQLTAHLQDVNRELTNQQEASVERQQQPPPETFDFKIKFAETKAHAKAIEMELRQME
VAQANRHMSLLTAFMPDSFLRPGGDHDCVLVLLLMPRLICKAELIRKQAQEKFELSENCS
ERPGLRGAAGEQLSFAAGLVYSLSLLQATLHRYEHALSQCNVDVYKKVGSLYPEMSAHER
SLDFLIELLHKDQLDETVNVEPLTKAIKYYQHLYSIHLAEQLEDCTMQLADHIKFTQSAL
DCMSVEVGRLRAFLQSGQEATDIALLLRDLETSCSDIRQFCKKIRRRMPGTDAPGIPAAL
AFGPQVSDTLLDCRKHLTWVVAVLQEVAAAAAQLIAPLAENEGLLVAALEELAFKASEQI
YGSPSSSPYECLRQSCNILISTMNKLATAMQEGEYDAERPPSKPPPVELRAAALRAEITD
AEGLGLKLEDRETVIKELKKSLKIKGEELSEANVRLSLLEKKLDSAAKDADERIEKVQTR
LEETQALLRKKEKEFEETMDALQADIDQLEAEKAELKLRLNSQSKRTIEGLRGPPPSGIA
TLVSGIAGGGAPGQAPGSLPGPGLVKDSPLLLQQISAMRLHISQLQHENSMLKGSQMKAS
LAALPPLHVAKLSLPPHEGPSSELAAGALYRKTSQLLETLNQLSTHTHVVDITRTSPAAK
SPSAQLMEQVAQLKALSDTIEKLKDEVLKETVTQRPGATVPTDFATFPSSAFLRAKEEQQ
DDTVYMGKVTFSCAAGLGQRHRLVLTQEQLHQLHSRLIS
NT seq
3720 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcagaggcaagtgcccggcctctgcgggtagggtcccgtgtggaggtgattgga
aagggccacagaggaactgtggcttatgttggggccacactctttgccactggcaaatgg
gtaggcgttattctggatgaagcaaaaggcaagaatgatggaactgtccaaggcaggaag
tattttacttgtgatgaaggtcatggcatctttgtgcgccagtcccagatccaggtattt
gaagatggagcagatactacttctccagagacacctgattcttctgcctcaaaggttctc
aaaagagagggagctgatacagcggcaaaggccagcaaactgcccactcgcccagccagt
actggagggcctggagccagtagctccttggggccctctggttcagcatcagcaggtgaa
ctgagcagcagtgagcccagcaccccagctcagactccactggcagcacccatcatcccc
acaccagccctcacttctcctggagcagcaccaccacttccttccccctccaaggaggag
gaggggttgagggctcaggtacgggacctggaggagaaactggagactctgcggctgaag
cgggcagaagacaaggcaaagttaaaagagctggagaaacacaagatccaactggagcag
gtgcaggaatggaagagcaaaatgcaagagcagcaggcagaccttcagcgtcgcctaaag
gaggcacggaaggaagccaaagaggctctggaggcaaaggagagatacatggaagagatg
gcagacactgctgatgccattgagatggccactctagacaaggagatggctgaagagagg
gcagagtctctgcagcaggaggtggaggccctgaaggaacgtgtggacgaacttaccaca
gacttggagatactcaaggctgaaattgaggaaaagggttcagatggagctgcatccagt
taccagctcaagcagcttgaggagcagaatgctcgcctgaaggatgccttggtgagaatg
cgggatctttcttcctcagagaagcaggagcacgtgaagctccagaagctcatggaaaaa
aagaaccaagagttggaagttgtgagacaacagagagaacgccttcaggaagagctgagc
caggcagagagcaccattgatgagctcaaggaacaggttgatgctgctctgggtgctgaa
gagatggtagagatgctgaccgaccggaacctgaatctggaagagaaagtgcgggagtta
cgagagactgtgggcgacttggaagcaatgaatgagatgaatgatgagctacaggaaaat
gcacgtgagacagaactggagttgcgagagcagctggatatggcaggtgcccgggtgcgg
gaggcccagaagcgtgtagaggcagctcaggagacagttgcagattaccagcaaaccatc
aagaagtaccgccagctgactgctcacctacaggatgttaatcgggaactgacaaaccag
caggaagcatctgtggagagacagcaacagccacctccagaaacttttgacttcaaaatc
aagtttgctgagactaaggcccatgccaaggctattgagatggaattaagacagatggaa
gtggcacaggccaaccgacacatgtccctgctgacagccttcatgcctgacagcttcctt
cggccaggaggggaccatgattgtgtcctggtgctactgctcatgcctcgtctcatttgc
aaggcagaactgattcggaagcaggcccaagagaagtttgaactaagtgagaactgttca
gagaggcctgggctgcgaggagctgcaggggagcagctcagctttgctgctgggctggta
tattcactgagtctgctgcaggccacactgcatcgttatgagcatgccctctctcagtgc
aatgtggatgtgtataagaaggtgggcagcctctaccctgagatgagtgcccatgagcgc
tccttagatttcctcattgagttgctacacaaggatcagctggatgagactgtcaatgtg
gaacctctcaccaaggctatcaagtactaccagcatctttatagcatccaccttgccgaa
cagctagaagactgtaccatgcagctggccgaccacattaagttcacccagagtgctctg
gactgcatgagtgtggaagtggggcggctgcgtgcctttttacagagtgggcaagaggct
acagatattgctcttctactccgggacctggaaacatcatgtagtgacatccgccagttc
tgcaagaagatccgaaggcgaatgccaggaacagatgctcctgggatcccagctgctctg
gcttttggaccacaggtatccgacacactcctagactgcagaaaacacttgacatgggtg
gtggctgtactgcaagaggtggcagctgccgctgcccagctcattgccccactggcagag
aatgaggggctacttgtggctgcactggaggaactggctttcaaagcaagcgagcagatc
tatgggagcccctccagcagcccctatgagtgtctgcgccagtcatgcaacatcctcatc
agcactatgaacaagctggccacagccatgcaggaaggggagtatgatgcagagcggccc
cccagcaagcctcctcctgttgaacttcgggctgcagcccttcgtgcagagatcacagat
gctgaaggcctaggtttgaagcttgaggatcgagagacagttattaaagaattgaagaag
tcacttaagattaagggagaggagctgagtgaggccaatgtgcgactgagcctcctagag
aagaaactggacagtgctgccaaggatgcagatgaacgcattgagaaagtccagacacgg
ctggaggagacccaggcactgctgcggaagaaagagaaagagtttgaagagaccatggat
gcgctccaggctgacattgaccagctagaagcagagaaggcagagctaaagctgcggcta
aacagccagtccaaacgcacaatcgaggggctccgggggcctcctccttcaggcattgct
accctggtctctggcattgctggtgggggcgctcctgggcaggctccaggttccttgcca
ggcccagggctggtgaaggattcacccctactgcttcagcagatctctgctatgaggctg
cacatctctcagcttcagcatgagaacagcatgcttaagggatcccagatgaaggcatcc
ttggcagctttgccccctctgcatgttgcaaagctttccctcccaccccatgagggccct
agcagtgagctagcagctggagcactgtatcgcaagaccagccagcttctggagacatta
aatcaactgagtacacatactcacgtagtagatatcactcgcaccagccctgctgccaag
agcccatcggctcagcttatggaacaagtggctcagctcaaggccctgagtgacaccatt
gagaagctcaaggatgaagtccttaaggagacagtaactcaacgccctggagccaccgtc
cccactgactttgccaccttcccttcttctgccttccttagggccaaggaagagcagcaa
gatgatacagtctacatgggcaaagtgaccttctcctgtgcagctggccttggacagcga
caccggctggtgctgacccaggagcagctgcaccagctacacagtcgcctcatctcttaa
DBGET
integrated database retrieval system
