KEGG   Dipodomys spectabilis (banner-tailed kangaroo rat): 122125181
Entry
122125181         CDS       T07891                                 
Symbol
Pcgf1
Name
(RefSeq) polycomb group RING finger protein 1
  KO
K11487  polycomb group RING finger protein 1
Organism
dsp  Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp03083  Polycomb repressive complex
dsp04550  Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:dsp00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    122125181 (Pcgf1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04550 Signaling pathways regulating pluripotency of stem cells
    122125181 (Pcgf1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:dsp03036]
    122125181 (Pcgf1)
Chromosome and associated proteins [BR:dsp03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     122125181 (Pcgf1)
SSDB
Motif
Pfam: RAWUL zf-C3HC4_2 zf-C3HC4 zf-RING_2 zf-rbx1 zf-C3HC4_3 Rad60-SLD zf-RING_UBOX zf-RING_5 ATG8 zf-Nse zf-ANAPC11 TRAF3_RING zf-C3HC4_4 ubiquitin zf-RING_10
Other DBs
NCBI-GeneID: 122125181
NCBI-ProteinID: XP_042555682
LinkDB
Position
Unknown
AA seq 259 aa
MASPQGGQIAIAMRLRNQLQSVYKMDPLRNEEEVRVKIKDLNEHIVCCLCAGYFVDATTI
TECLHTFCKSCIVKYLQTSKYCPMCNIKIHETQPLLNLKLDRVMQDIVYKLVPGLQDSEE
KRIREFYQSRGLDRVTQPSGEEPALSNLGLPFSSFDHSKAHYYRYDEQLSLCLERLSSGK
DKNKNVLQNKYVRCSVRAEVRHLRRVLCQRLMLNPQNVQLLFDNEVLPDHMTMKQIWLSR
WFGKPSPLLLQYSVKEKRR
NT seq 780 nt   +upstreamnt  +downstreamnt
atggcgtctcctcaggggggccagattgcgatcgcgatgaggcttcggaaccagctccag
tcagtgtacaagatggacccgctacggaacgaggaggaggtccgagtgaagatcaaagac
ctgaatgagcatattgtttgctgcctgtgtgcaggctacttcgtggatgccaccacaatc
acagagtgtcttcatactttttgcaagagttgtattgtgaagtacctccaaaccagcaaa
tactgccccatgtgtaacatcaagatccatgagacacagccactactaaacctcaaacta
gaccgggtcatgcaggacatcgtgtacaagctagtgcctggcttgcaagacagtgaagag
aaacggattcgggaattctaccagtcccgaggcttggacagggtcacccagcccagtggg
gaagagccagccctcagcaaccttggcctccccttcagcagcttcgaccactcaaaagcc
cactactatcgctatgatgaacagctgagcttatgcctggagcggctgagttctggcaaa
gacaagaataaaaatgtcctgcagaacaagtatgttagatgttctgttagagctgaagta
cgccatctccggagggtcctttgtcaacgcctgatgctaaatccacagaatgtacagctc
ctttttgacaatgaagttctccctgatcacatgacaatgaaacagatttggttgtctcgc
tggtttggcaagccatcccctttgcttttacaatacagtgtaaaagagaagaggaggtag

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