Dipodomys spectabilis (banner-tailed kangaroo rat): 122125832
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Entry
122125832 CDS
T07891
Symbol
Dhx34
Name
(RefSeq) probable ATP-dependent RNA helicase DHX34
KO
K20101
ATP-dependent RNA helicase DHX34 [EC:
5.6.2.6
]
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dsp03019
]
122125832 (Dhx34)
Enzymes [BR:
dsp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
122125832 (Dhx34)
Messenger RNA biogenesis [BR:
dsp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
122125832 (Dhx34)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2_DHX34
Helicase_C
OB_NTP_bind
HA2_C
DEAD
HA2_N
AAA_22
AAA_16
AAA_19
nSTAND3
ResIII
XAF1_C
TsaE
Motif
Other DBs
NCBI-GeneID:
122125832
NCBI-ProteinID:
XP_042556406
LinkDB
All DBs
Position
Unknown
AA seq
1147 aa
AA seq
DB search
MPSPGTREGRDRRDRHWAPSAKEAPEKWDWNCPETRGLLEDTFFGDGGCIRPGSEDCQKF
WAFFERLQRYQSLRPSRKEETEPGSTPHGLPALADLPRTYDPRYRINLSILGPDPRGSRG
LATRLPPERVSEFRRALLHYLDFGQKQAFARLAKLQRERAALPIAQYGRRLLQTLAEHQV
VVVAGDTGCGKSTQVPQYLLAAGFSHVACTQPRRIACISLAKRVAFESLSQYGSQVGYQI
RFESTRSSATKIVFLTVGLLLRQIQREPSLPQYQVLIVDEVHERHLHSDFLLGVLHRLLP
RRPDLKVILMSATINIELFSSYFGHAPVVQVPGRLFPITVVYQPQEAEPAMSKSEKLDPR
PFLRVLETIDNKYPPEERGDLLVFLSGMAEISSVLEAAQTYASHTQRWIVLPLHSALSVA
DQDKVFDVAPPGVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWI
SQASAEQRKGRAGRTGPGVCYRLYAESDYDAFTPYPVPEIRRVALDTLVLQMKSMSVGDP
RTFPFIEPPPPASLETAILYLRDQGALDSSEALTPIGCLLAQLPVDVVIGKMLILGAMFS
LAEPVLTVAAALSVQSPFTRSAQGSLECAAARKPLESDQGDPFTLFNVFNAWVQVKSERG
GNSRRWCRRRGVEEQRLYEMANLRRQFKELLEDHGLLAGAPAPPRDGSSRLQERRERRAL
QQLKRQHEEGAGRGRKVLRLREDRAAGSSDEDDPAGPGAPDGGVDIQDVKFKLRHNLAQL
QVAASAAQDLSGERLALLKLLLTRGLYPQLAVPDAFNSGRKDSDQIFHTQAKQGAVLHPT
CVFASSPEVLHAQELEAPDQGSRDVRDKMSRSHQLLTFVSLLETNKPYLVNCVRVPALQS
LLLLSRSLDTSGDCSRLVADGWLELRLADSESAVRLLATSLKLRARWESALDQQLARQAL
RRRQQQRQRPEEEEEERLPIHSKEVAALGRELLQFMASKVPYSLRRLTGLETQNLYVGPQ
TVTTAPSLPGLFGDSTLSPHPTKGGYVVTDFLTYNCLVSDTDLYSDCLRTFWTCPHCGLH
LPLTPLERMAHENTCAQAPQEDGAEAEEDPAPIQKASALQRPYHCDTCGQDFLFSPTEAL
RHRRQHL
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
atgccctccccggggacaagggaggggcgggaccgccgagaccgccactgggctcctagt
gccaaagaagcccctgagaagtgggactggaattgtccagaaacccggggcctcttagag
gacactttcttcggtgatggaggttgtatccgtccgggctcggaggactgccagaagttc
tgggccttctttgagcgtctgcagaggtaccagagtctcaggccatccaggaaggaggag
acagagcctggatccaccccacatggcctcccagccctagccgacctccctcgcacttac
gacccccgctaccgcatcaacctgtccatccttggccccgatccccggggctctcggggg
ctggccactcgcctgcctccggagagggtgtctgagttccgccgggctctcttgcattac
ctggacttcggccagaagcaggcgttcgcgcggctggccaagctgcaacgggagcgcgca
gctcttcccatcgcccagtacgggcgccgcctgttgcagacgctggcagagcaccaggtg
gtggtggtggctggggacacaggctgtggcaagtctacgcaggtgccccagtacctgctg
gctgccggcttcagtcatgtggcgtgcactcagccccggcgaatcgcctgcatctccttg
gccaagcgtgtggccttcgagagcctcagtcagtatggctcacaggtcggctaccagatc
cgcttcgaaagcacacggtcgtccgccaccaagattgtgttcctgacggtggggctgctc
ctccggcagatccagcgggagcccagcttgcctcagtaccaggtcctcatcgtggatgaa
gtccatgagcgccacctccacagtgacttcctgttgggggtcctccaccgcctgctgccc
aggcggcctgacctcaaggtcatcctcatgtcagccaccatcaacatcgagctcttctcc
agctactttggccacgcccccgtggtgcaggtgccgggccggctcttccccatcacggtt
gtataccagccacaggaggcagagcccgcgatgtccaagtcagagaagctggaccctcgg
cctttcctgagggtgctggagaccatcgacaacaagtacccccctgaagaacgaggggac
ctgctggtcttccttagcggcatggcagagatcagctcagtgctggaggctgctcagacc
tatgccagccacacccagcgctggatagtgctgccgctgcacagcgccctgtctgtggcc
gaccaggacaaggtgttcgacgtggcgccccctggagtccggaaatgcattctctcaacc
aacattgccgagacctcggtcaccatcgacgggatccgcttcgtagtggattctgggaag
gtgaaagagatgagctacgacccacaggccaagctgcagcggctgcaggagttctggatc
agccaggccagcgccgagcagcgcaagggccgcgcaggccgcacagggcccggcgtctgc
taccgcctctacgccgagtccgactacgacgccttcaccccctaccctgtgcccgagatc
cgaagggtagctctggacacgctggtgctgcagatgaagagcatgagcgtgggagacccc
cgaaccttccctttcatcgagccccctccaccagccagcctggaaaccgccatcctctac
ctccgagaccagggggccctggacagctcagaggccctcacccccatcgggtgcctgctg
gcccagctgcctgtggacgtggtgatcgggaagatgctgatcctgggagccatgttcagc
ctggcggagccggtgctcaccgtagccgcggccctcagcgtccagtcgcccttcacccgc
agcgcccagggcagcctggagtgcgcagctgcccggaagcccctggagagcgaccaggga
gaccccttcacacttttcaatgtcttcaacgcctgggtgcaggtgaagtctgagcgtggt
gggaactcgcgccgctggtgccgccggcgcggcgtggaggagcagcgcctgtatgagatg
gccaacctgcggcgccagttcaaggagctgctggaggaccacgggctgctggctggggcc
ccagcgccccccagggatggcagcagccggctgcaggagcggcgggagcggcgggcgctg
cagcagctcaagcggcagcacgaggagggcgcgggccgcgggcggaaggtgctgcggctg
cgcgaggaccgggccgcgggttccagcgacgaggacgaccctgcgggccccggggctccc
gacggcggcgtggacatccaggacgtgaagttcaagctccgccacaacctggcgcagctg
caggtggcagccagcgcggcccaggacctgagcggcgagcgcctggcactgctcaagctg
ctgctgacccggggcctctacccgcagctggctgtgcccgacgccttcaacagcggccgc
aaggactctgaccagattttccacacccaggccaagcagggcgccgtgctgcaccccacc
tgcgtcttcgccagcagccccgaggtgctgcacgcccaggagctagaagccccagaccag
gggagccgagatgtccgggacaagatgagccgctcacaccagctcctcaccttcgtctcc
ctgctggagaccaacaagccctacctggtcaactgcgtccgtgtcccagccctccagtcc
ctcctgctgctcagccgctctctggacaccagtggtgactgctcccgcctggtggccgac
ggctggctggagctgcggctggcggacagtgagagtgccgtccggctcctggcaacctcc
ctgaagctccgagcccgctgggaaagcgccctggaccagcagctggcacgccaggccctg
cggcggcggcagcagcagcgacaaaggcctgaggaagaggaagaggagaggctgccgatc
cacagcaaggaggtggccgccctgggcagggagctgctgcagttcatggcctccaaggtt
ccctacagcctgcggcggctcacaggccttgagacccagaacctctatgtgggaccccag
acagtcacaaccgcccctagtctccctggtctctttggagactccaccctgtccccccac
cccaccaaagggggctatgtggtcactgacttcctcacctacaactgccttgtgagcgac
acagacctgtacagtgactgtctgcgtaccttctggacctgcccgcactgcggcctgcac
ctgccgctcacgcccttggagcgcatggctcacgagaacacctgtgcccaggccccgcag
gaggatggcgcagaggcagaagaagaccccgcacccatccagaaggcttccgccctgcag
aggccctaccactgcgacacctgcggccaggacttcctgttctcccccactgaggccctg
cggcaccggcggcagcacctgtga
DBGET
integrated database retrieval system
