Dipodomys spectabilis (banner-tailed kangaroo rat): 122126213
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Entry
122126213 CDS
T07891
Name
(RefSeq) ATP-dependent RNA helicase DDX19A
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp03013
Nucleocytoplasmic transport
dsp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122126213
03015 mRNA surveillance pathway
122126213
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dsp03019
]
122126213
Enzymes [BR:
dsp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122126213
Messenger RNA biogenesis [BR:
dsp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
122126213
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
122126213
NCBI-ProteinID:
XP_042556805
LinkDB
All DBs
Position
Unknown
AA seq
478 aa
AA seq
DB search
MATDSWALAVDEQEAAVKSMNNLQIKEEKVKADTNGVIKTSTPAEKTDEEEKEDRAAQSL
LNKLIRSNLVDNTNQVEVLQRDPNSPLYSVKSFEELRLKPQLLQGVYAMGFNRPSKIQEN
ALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSRVEPADRYPQCLCLSPTYELALQTGKV
IEQMGKFHPELKLAYAVRGNKLERGQKISEQIVIGTPGTVLDWCSKLKFIDPKKIKVFVL
DEADVMIATQGHQDQSIRIQRMLPKNCQMLLFSATFEDSVWQFAQKVVPDPNVIKLKREE
ETLDTIKQYYVLCNNRDEKFQALCNLYGAITIAQAMIFCHTRKTASWLAAELSKEGHQVA
LLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDNE
TYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNKIQEHFNKKIERLDTDDLDEIEKIAN
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgactcgtgggccctagcggtggacgagcaagaggcggctgtcaagtcgatg
aacaatttgcagatcaaggaagagaaagtcaaagcagacactaatggtgttatcaaaacc
agcactcctgcagagaagacagatgaagaggagaaagaggacagagctgcacagtcttta
ctcaataagctgatcagaagcaaccttgtggataacacaaaccaagtggaagtcctgcaa
cgggatcccaactccccactctactcagtgaagtcttttgaagagcttcgcctgaagcca
cagcttctccaaggcgtttatgccatgggcttcaatcgaccatctaagatacaagagaat
gcactacccatgatgcttgctgaacccccacagaatctaattgcccagtctcagtctggc
accggaaaaacagctgcctttgtcctggccatgctcagtagagtggaaccagcagacaga
taccctcagtgtctgtgtctctccccaacatatgagctggcacttcaaacaggaaaagtg
attgagcaaatgggaaaatttcatccagaactaaagcttgcctatgctgtccgtggcaat
aaattggaaagaggtcagaagatcagtgagcagattgtcattggcactccggggactgtc
ctggactggtgctccaagctcaagttcattgaccccaagaagatcaaggtgtttgttctg
gacgaggcagacgtgatgatagctactcagggccaccaggaccaaagcatccgcatccag
aggatgctgcccaagaactgccagatgctgcttttctctgccacctttgaagactcagtg
tggcagtttgcccagaaagtggtcccagaccccaatgttatcaaactgaagcgcgaggag
gagacgttggacaccatcaagcagtattacgtcctgtgcaataacagagatgagaagttc
caggccttgtgcaacctgtatggggccatcaccatcgctcaagccatgatcttctgccac
acccgcaaaactgctagttggctggcagcagagctctccaaagaagggcaccaggtggct
ctgctgagtggtgagatgatggtggagcagagggctgccgtgattgagcgcttccgcgaa
ggcaaggagaaagttctggtgaccaccaacgtgtgtgcccgggggattgatgttgaacaa
gtgtctgttgtcatcaacttcgatcttcctgtggacaaggatgggaaccccgacaatgag
acttacctgcaccggattgggcgcaccggccgctttggcaaaagaggcctggccgtgaac
atggtcgacagcaagcacagcatgaacatcctgaacaaaatccaggagcattttaataag
aagatagaaagattggatacggatgatttggatgagattgaaaaaatagctaactga
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