KEGG   Dipodomys spectabilis (banner-tailed kangaroo rat): 122127062
Entry
122127062         CDS       T07891                                 
Name
(RefSeq) THO complex subunit 7 homolog
  KO
K13176  THO complex subunit 7
Organism
dsp  Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:dsp00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    122127062
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dsp03019]
    122127062
   03041 Spliceosome [BR:dsp03041]
    122127062
Messenger RNA biogenesis [BR:dsp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     122127062
Spliceosome [BR:dsp03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    122127062
SSDB
Motif
Pfam: THOC7 OVT1 UPF0193 UPF0242 DUF4407 OSTMP1 DASH_Dad2 Peptidase_S10 COG6_N Sec8_N DUF7809 FliJ
Other DBs
NCBI-GeneID: 122127062
NCBI-ProteinID: XP_042557505
LinkDB
Position
Unknown
AA seq 204 aa
MGTSTDDEVIRKCLLIDGDGAGDDRRINLLVKSFVKWCNSGSHEEGYGQYQRMLSTLSQC
EFSMGKTLLVYDMNLREMENYEKIYKEIEGNIAEAHKKIAECKKEILQAKRIRKNRQEYD
ALAKVIQRHPDRHQTLKELEALGKELEHLSHIKESVEDKLELRRKQFHVLLSTIHELQQT
LESDEKLSEGEEGEETFMDIEPKS
NT seq 615 nt   +upstreamnt  +downstreamnt
atgggaacttccacggatgatgaagtcatacggaagtgtctcctaattgatggagatgga
gcaggtgacgatcggagaattaatctgctagtgaaaagttttgttaagtggtgcaactct
ggatcccatgaagaaggatatggccagtaccaacgtatgctcagcaccttgtctcaatgt
gaattttcaatgggcaaaactttgctggtgtatgatatgaatctcagagaaatggaaaat
tatgaaaagatttacaaagaaatagaaggtaacattgctgaagcacataaaaagattgct
gagtgcaaaaaggagattcttcaagcaaaaagaatacggaagaatcgccaagaatatgat
gctttggcaaaagtgatccagcgtcatccagacaggcatcagacattaaaggaactagag
gctctgggaaaagaattagaacatctttcacatattaaagaaagtgttgaagacaagctg
gaattgagacggaagcagtttcatgttcttcttagtactatccatgaacttcagcaaaca
ttggaaagtgatgaaaagctctctgagggagaagaaggtgaagagactttcatggatata
gaacctaagtcatag

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