Dipodomys spectabilis (banner-tailed kangaroo rat): 122127095
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Entry
122127095 CDS
T07891
Symbol
Smarca5
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
122127095 (Smarca5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dsp03021
]
122127095 (Smarca5)
03036 Chromosome and associated proteins [BR:
dsp03036
]
122127095 (Smarca5)
Transcription machinery [BR:
dsp03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
122127095 (Smarca5)
Chromosome and associated proteins [BR:
dsp03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
122127095 (Smarca5)
RSF complex
122127095 (Smarca5)
WICH complex
122127095 (Smarca5)
B-WICH complex
122127095 (Smarca5)
NORC complex
122127095 (Smarca5)
BRF complex
122127095 (Smarca5)
NuRF complex (fruit fly)
122127095 (Smarca5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
HAND
Helicase_C
ResIII
DEAD
HDA2-3
Myb_DNA-binding
DBINO
AAA_14
Motif
Other DBs
NCBI-GeneID:
122127095
NCBI-ProteinID:
XP_042557540
LinkDB
All DBs
Position
Unknown
AA seq
1050 aa
AA seq
DB search
MSSAAEPPPPPPPESAPAKPAASAASGGTTGGNKGGPEGAAAQAAAAAAGPADADMEEVF
DDASPGKQKEIQEPDPTYEEKMQTDRANRFEYLLKQTELFAHFIQPAAQKTPTSPLKMKP
GRPRIKKDEKQNLLSVGDYRHRRTEQEEDEELLTESSKATNVCTRFEDSPSYVKWGKLRD
YQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTLH
NWMSEFKRWVPTLRSVCLIGDKEQRAAFVRDVLLPGEWDVCVTSYEMLIKEKSVFKKFNW
RYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSA
DDFDSWFDTNNCLGDQKLVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQRE
WYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNS
GKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSI
IAYNEPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTV
RVFRFITDNTVEERIVERAEMKLRLDSIVIQQGRLVDQNLNKIGKDEMLQMIRHGATHVF
ASKESEITDEDIDGILERGAKKTAEMNEKLSKMGESSLRNFTMDTESSVYNFEGEDYREK
QKIAFTEWIEPPKRERKANYAVDAYFREALRVSEPKAPKAPRPPKQPNVQDFQFFPPRLF
ELLEKEILYYRKTIGYKVPRSPDLPNAAQAQKEEQLKIDEAEPLNDEELEEKEKLLTQGF
TNWNKRDFNQFIKANEKWGRDDIENIAREVEGKTPEEVIEYSAVFWERCNELQDIEKIMA
QIERGEARIQRRISIKKALDTKIGRYKAPFHQLRISYGTNKGKNYTEEEDRFLICMLHKL
GFDKENVYDELRQCIRNSPQFRFDWFLKSRTAMELQRRCNTLITLIERENMELEEKEKAE
KKKRGPKPTTQKRKMDGAPDGRGRKKKLKL
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccgcggccgagcctccgccacccccgcctcccgagagcgcgcccgccaagccc
gcagcctcggccgccagcggcgggaccaccggcggcaacaaaggcggccccgagggcgcc
gcggcccaggcggccgccgccgccgcgggccccgcggacgccgacatggaggaagtattt
gatgacgcctcacctggaaagcagaaagaaatccaagaaccagatcctacctatgaagag
aaaatgcaaaccgaccgagcaaatagatttgagtatttattaaagcagacagagttgttt
gcacatttcattcagcctgctgctcagaagactccaacctcacctttaaagatgaaacca
gggcgcccacgaataaagaaggatgagaaacagaacttgctctcagttggcgactatcga
caccgtaggacggagcaagaggaggatgaagaattactaacagaaagctccaaagcaacc
aatgtgtgcactcgatttgaagattctccctcatatgtcaaatggggtaaactaagagat
tatcaggtccgaggattgaattggcttatttctttgtatgagaacggcatcaatggtatc
cttgcagatgaaatgggtctggggaagactcttcaaaccatttctctgcttggctacatg
aaacactatagaaacattcctggtcctcatatggttttggttcctaagtctacattacac
aactggatgagtgaattcaagagatgggtaccaacacttaggtctgtttgtttgatagga
gataaagaacaaagagctgcttttgtccgggatgttttattaccaggagaatgggatgtg
tgtgtgacatcttacgagatgcttattaaggagaagtctgtgttcaaaaaatttaactgg
agatacttggttatagatgaagctcataggatcaaaaatgaaaaatctaagctgtcagaa
atagtgcgggaatttaagaccacaaatcggctgttactcactggaacacctctgcagaat
aacttacatgagctgtggtcacttctgaattttttgttaccagatgtgtttaattcagct
gatgactttgattcctggtttgataccaacaactgccttggggatcagaagctagttgag
aggcttcatatggttttgcgtccatttcttcttcgtcgaattaaggctgatgtggaaaag
agtttacctccaaagaaggaagtcaaaatctacgtaggtctcagcaaaatgcaaagggaa
tggtatactcggatattaatgaaggatatagacatactaaactcagcaggaaagatggat
aaaatgaggttattgaatatcttaatgcagttgaggaagtgctgtaatcacccatacctc
ttcgatggagctgaacctggtccaccttacacaacagatatgcatctggttaccaacagt
ggcaaaatggtggtactagacaagttgctccccaaattaaaagaacaaggttcgcgagta
ttaatcttcagtcaaatgacaagagtactagacattttggaagattattgcatgtggaga
aattatgagtactgtaggttggatggacagacaccccatgatgaaagacaggattccatc
atcgcgtacaatgaaccaaacagtaccaagtttgttttcatgttaagcacgcgtgctggt
ggccttggcatcaatcttgctactgctgatgtggtcattttatatgattcagattggaat
ccccaagtggatctccaggcgatggaccgagctcacagaattggacagacgaagacagtc
agagtgttccgctttataacagataacacagtggaagaaagaatcgtggaacgtgccgag
atgaaactcagactggactcaatagttattcagcaagggaggcttgtagatcagaatctg
aacaaaatcgggaaagatgaaatgcttcaaatgatacgacatggagccactcatgtattt
gcctcaaaagagagtgaaatcactgacgaggacatcgatggcattctggaaagaggtgca
aagaagactgcagaaatgaatgaaaagctctccaagatgggtgaaagctcccttaggaac
ttcacaatggacactgagtcaagtgtttataactttgagggggaagactacagagaaaaa
caaaagattgcattcacagagtggattgaacctcctaaacgagagaggaaggctaactac
gctgtcgatgcctatttcagggaagcgcttcgagtcagtgaaccgaaagcacccaaggct
cctagacctccaaaacaacccaatgttcaggatttccagttctttcccccccgtttattt
gaattattggaaaaagaaattctgtattacagaaaaactattgggtacaaggtacctcga
agtcctgacctacctaatgcagcccaggcccagaaggaagaacagctcaaaatcgatgaa
gcagaaccacttaatgatgaagaattagaagaaaaagagaagcttttgacacagggattt
actaattggaataagagagattttaaccagtttatcaaagccaatgagaagtggggccgt
gatgatattgaaaacatagccagagaagtggaagggaaaactccagaagaagtcattgaa
tactcagctgtgttctgggaaagatgcaatgagctccaggacatagagaagattatggct
cagatagagaggggagaggcaagaatccaaagaagaataagtatcaaaaaagcacttgat
acaaagattggccggtacaaagcaccttttcatcagctgagaatatcgtatggcactaac
aaaggaaaaaactacactgaagaagaggatcgatttctcatctgcatgcttcacaaactc
ggatttgacaaggaaaatgtttatgatgaattgcgacagtgtattcgaaactcccctcag
ttcagatttgattggtttcttaagtccagaactgcaatggaactgcagaggaggtgtaat
acccttattaccttgattgaaagagaaaacatggaactagaagagaaagagaaggcagag
aaaaagaaacgcggaccaaagcctacaacacagaaacgtaagatggatggagcacctgat
ggtcgagggaggaaaaagaagctgaaactatga
DBGET
integrated database retrieval system
