Dipodomys spectabilis (banner-tailed kangaroo rat): 122127107
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Entry
122127107 CDS
T07891
Symbol
Herc3
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC3 isoform X1
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122127107 (Herc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dsp04121
]
122127107 (Herc3)
Enzymes [BR:
dsp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
122127107 (Herc3)
Ubiquitin system [BR:
dsp04121
]
Ubiquitin ligases (E3)
HECT type E3
122127107 (Herc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RCC1
HECT
RCC1_2
Motif
Other DBs
NCBI-GeneID:
122127107
NCBI-ProteinID:
XP_042557563
LinkDB
All DBs
Position
Unknown
AA seq
1050 aa
AA seq
DB search
MLCWGYWSLGQPGIGTNLQRIVAEPQVCGFVSDRSVKEVACGGNHSVFLLEDGEVYTCGL
NTKGQLGHEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMT
TEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQAS
PQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDKKDRESPCHVKLLR
TQKVVYISCGEEHTAVLTKSGGVFTFGAGYCGQLGHDSMNDEVNPRRVLELMGSEVTQIA
CGRQHTLAFVPSSGLIYAFGCGARGQLGTGHNCNVKCPSPVKGHWAAHSGQLSARADRFK
YHIVKQIFSGGDQTFVLCSKYESSSPAVDFRTMSQAHYTSLINDETIAVWRQKLSEHNNA
NTINGVVQILSSAACWNGSFLEKKIDEHFKTSPKIPGIDLNSTRVLFEKLMNSQHAMILE
QILNSFQSCLIPQLSSSPPDVEAMRIYLILPEFPLLQDSKYYISLTIPLAMAILRLDTNP
SKVLDNWWSQVCPKYFMKLVNLYKGAALYLLRGRKTFLLPALFDNYITAALKLLEKLYKV
NLKVKHVEYDTFYIPEISNLVDIQEDYLMWFLHQAGMKARPSIIQDAVTLCAYPFIFDAQ
AKTKMLQTDAELQMQVAVNGANLQNVFMLLTLEPLLARSPFLVLHVRRDNLVGDALRELS
IHSDIDLKKPLKVIFDGEEAVDAGGVTKEFFLLLLKELLNPIYGMFTYYQDSNLLWFSDT
CFVEHNWFHLIGITCGLAIYNSTVVDLHFPLALYKKLLNVKPGLEDLKELSPTEGRSLQE
LLDYPGEDIEETFCLNFTICRESYGVVEQKKLIPGGDGVPVGKGNRQEFVDAYVNYVFQV
SIHEWYTAFSSGFLKVCGGKVLELFQPSELRAMMVGNSNYNWDELQETAIYKGDYSATHP
TVKLFWETFHEFPLEKKKKFLLFLTGSDRIPIYGMASLQIVIQSTASGEEYFPVAHTCYN
LLDLPKYSSKEILRARLTQALDNYEGFSLA
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgttatgttggggctattggtctctgggccaaccaggaatcggcacgaacctgcaaaga
attgtggctgagccacaggtgtgcggattcgtatcagacagaagcgtcaaggaagtggcc
tgtggaggaaaccactccgtgttcctgctggaggacggggaggtctacacgtgcggcctg
aacaccaagggccagctgggccacgagagggaaggcaacaagccagaacaaattggagct
ttggcagaccagcacatcattcatgtggcctgtggcgagtcccacagtctggccctcagt
gaccggggccagctgttttcttggggtgccgggagtgatggtcaactaggtctcatgaca
actgaggattctgtggcggtgcccaggttaatacagaagctgaaccagcagaccatatta
caagtttcctgtggcaactggcattgtttggctcttgcagctgatggccagttcttcacc
tggggcaagaacagccacgggcagctgggtctgggaaaggagttcccctcccaagccagc
ccccagagggtgcggtccctggaggggatcccgctggcacaggtggctgcaggaggggct
cacagctttgccctgtctctctcaggagccgtttttggctgggggatgaataatgcaggg
cagctagggctcagtgataaaaaagatcgagagtccccgtgccatgtgaaactcctacga
acacagaaggttgtctatattagttgtggagaagaacacacagctgtcctcacaaagagt
ggaggtgtgtttacctttggtgccggatactgtgggcagctcggacatgactccatgaat
gatgaggtgaatcccagaagagttctagagctgatgggcagtgaagttactcagattgcc
tgtggccgacaacacaccctagccttcgtgccttcttccggactcatctatgcatttggc
tgtggagcaagaggccagctgggaactggacacaattgtaacgtgaagtgcccgtctcct
gtgaaggggcactgggccgcgcacagcggccagctttcagcccgagctgatcgatttaaa
taccatattgttaagcagatcttctctggaggagaccaaacttttgtactttgctccaaa
tatgagagttcttctcctgctgttgacttcagaaccatgagccaagcacattataccagt
ttaataaatgatgaaaccatagcagtttggagacaaaaactctcagaacacaacaatgca
aatacaatcaatggtgttgtccagatattatcttctgcagcctgttggaatggaagtttt
cttgaaaaaaaaattgatgaacattttaaaacaagtccgaaaatccctgggattgacctg
aactcaactagagtgttatttgagaagttaatgaactctcagcatgccatgattctagaa
cagatcttaaacagctttcaaagttgtctgattcctcagttgtcaagttcaccaccagat
gtcgaagccatgaggatctatttaatactccctgaatttcccctgctccaagattccaag
tattacatatcgctgactattcccttggcaatggccattctgcggctggatacaaacccc
agcaaagtattagataactggtggtctcaggtatgcccaaaatatttcatgaagctggta
aacctctataaaggtgcagccctttatctcctgaggggaaggaagacgttcttacttcct
gcactgtttgacaattacatcacagcagctctcaagctcttggagaagttatacaaggta
aatcttaaggtgaaacacgtggaatatgatacattttacattcctgagatttctaacctt
gtggacattcaggaagactacctcatgtggttcttgcatcaagcgggaatgaaagctaga
ccatctataatacaggatgctgtaacactatgcgcctaccctttcatctttgatgcccaa
gccaagaccaaaatgctacagactgatgctgaattacaaatgcaggtggccgtcaacggc
gccaacctgcagaacgtcttcatgcttctcaccctggagcctctgctggccagaagcccc
ttcctggtccttcatgttcgccgggacaacctcgttggagacgccctgagagagctgagc
attcattctgatattgacttgaaaaagcctctcaaagtaatctttgacggggaggaagcg
gtggatgctggcggcgttaccaaggagttctttcttctgctgttgaaagaacttttgaat
cccatctatgggatgttcacgtactatcaggactcaaatctcttgtggttttcagataca
tgttttgtagaacataactggtttcacttgattggcataacctgcggactggccatctac
aactccaccgtggtagacctccacttccccttggctctctacaagaagttactgaacgta
aagcctggcttggaagacttaaaggagctgtcccctactgaaggaagaagccttcaagag
cttttagattaccctggcgaggacatcgaggagactttctgcctcaacttcacgatctgc
cgagaaagctatggagtggttgaacagaagaagctgattcctgggggcgacggggtgccc
gtgggtaagggcaacaggcaggaatttgtggatgcctatgtgaattatgtcttccaagtc
tccattcatgaatggtacacagccttctctagcggcttcctgaaggtgtgcggtggcaaa
gtccttgagctcttccagccttcagaactgagggccatgatggtggggaacagcaactac
aactgggacgagctacaagagacggccatctataagggtgattactcagccacacatccc
actgtgaaactattctgggaaacatttcatgagtttccactggagaagaagaagaagttt
ctcttgttccttactggcagcgaccggattcccatctacggcatggccagtctgcagatt
gtcatccagtccacagccagcggggaggagtactttcctgtggcccacacctgctacaac
ctgctcgacctccctaagtacagcagcaaagagattctgagggctcggctcacccaggcc
cttgacaactatgagggttttagtttggcctga
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integrated database retrieval system
