Dipodomys spectabilis (banner-tailed kangaroo rat): 122127339
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Entry
122127339 CDS
T07891
Symbol
Ssu72
Name
(RefSeq) RNA polymerase II subunit A C-terminal domain phosphatase SSU72
KO
K15544
RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:
3.1.3.16
]
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122127339 (Ssu72)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dsp03021
]
122127339 (Ssu72)
03019 Messenger RNA biogenesis [BR:
dsp03019
]
122127339 (Ssu72)
Enzymes [BR:
dsp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
122127339 (Ssu72)
Transcription machinery [BR:
dsp03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
122127339 (Ssu72)
Messenger RNA biogenesis [BR:
dsp03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
122127339 (Ssu72)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssu72
Motif
Other DBs
NCBI-GeneID:
122127339
NCBI-ProteinID:
XP_042557888
LinkDB
All DBs
Position
Unknown
AA seq
194 aa
AA seq
DB search
MPSSPLRVAVVCSSNQNRSMEAHNILSKRGFSVRSFGTGTHVKLPGPAPDKPNVYDFKTT
YDQMYNDLLRKDKELYTQNGILHMLDRNKRIKPRPERFQNCKDLFDLILTCEERVYDQVV
EDLNSREQETCQPVHVVNVDIQDNHEEATLGAFLICELCQCIQHTEDMENEIDELLQEFE
EKSGRAFLHTVCFY
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcgtcgccgctgcgggtggcggtggtgtgctcgagtaaccagaaccggagcatg
gaggctcacaacatcctcagcaagcgaggattcagcgtacgatcctttggcacaggaact
cacgtgaagctcccaggaccagcaccagacaagcccaatgtctatgatttcaaaaccaca
tatgaccagatgtacaatgatcttctcaggaaagacaaagaactctatacgcagaatggc
attttacatatgttggacagaaataagagaatcaagcccaggccagagaggttccagaac
tgcaaggacctgttcgatctgatactcacttgtgaagagagagtctatgaccaggtggtg
gaagatctgaactccagagaacaggagacttgccagccagttcacgtggtcaatgtggac
atccaggacaaccacgaagaggccaccttgggggcctttctcatctgtgagctctgccag
tgtatccagcacacggaggatatggaaaacgagatcgatgagctgctgcaggaatttgag
gagaagagtggccgagccttcctgcacacggtctgcttctactga
DBGET
integrated database retrieval system
