Dipodomys spectabilis (banner-tailed kangaroo rat): 122127895
Help
Entry
122127895 CDS
T07891
Symbol
Ddx27
Name
(RefSeq) probable ATP-dependent RNA helicase DDX27
KO
K13181
ATP-dependent RNA helicase DDX27 [EC:
5.6.2.7
]
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dsp03041
]
122127895 (Ddx27)
03009 Ribosome biogenesis [BR:
dsp03009
]
122127895 (Ddx27)
Enzymes [BR:
dsp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122127895 (Ddx27)
Spliceosome [BR:
dsp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
122127895 (Ddx27)
Ribosome biogenesis [BR:
dsp03009
]
Eukaryotic type
Pre-60S particles
Helicases
122127895 (Ddx27)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
PRK
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
122127895
NCBI-ProteinID:
XP_042558126
LinkDB
All DBs
Position
Unknown
AA seq
761 aa
AA seq
DB search
MLAELGLIGTIGEDDEVPVEPESDSGDDEEEGPIVLGRKQKALQKNRSADFNPDFVFTEK
EGMYDGSWALADVMSQLKKKRAATTLDEKIEKVRKKRKAEEKEVKSGKSEEKEAGVGGGL
EEQEDGEGGKDEDSAEEESETDYSSADEKVLTKADTLKVKERKRKKKGQEAGGFFEDASQ
YDESLSFQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFA
LPVLERLIYKPRQAPVTRVLVLVPTRELGIQVHSVTRQLAQFCSITTCLAVGGLDVKSQE
AALRAAPDVLIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEIIRMCS
HHRQTMLFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAPFLRQEFIRIRPNREGDREAI
VAALLTRTFPDHVMLFTQTKKQAHRMHILLGLLGLQVGELHGNLSQTQRLEALRRFKDEQ
IDILVATDVAARGLDIEGVKTVINFTMPNTVKHYVHRVGRTARAGRAGRSVSLVGEEERK
MLKEIVKTAKAPVKARILPQDVILKFRDKIEKMEKDVYAVLQLEAEEKELQQSEAQISTA
KRLLEKGQEAKEQQPERSWFQTKEERKKEKIAKALQEFDLALRGKKKRKKFMKDVKKKGE
MTAEERSQFEILKSQMFAERLAKRNRRAKRARVMPEEEPAKGPAKKQRKISVFDEELTNT
SKKALKQYRAGPSFEERKQLGLPHQRRGGNFKSKSRYKRKK
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atgctggcggagttaggtctgatcgggaccatcggcgaggatgacgaggtgccggtggag
cccgagtccgactccggagacgacgaggaggagggccccattgtgctgggcagaaagcag
aaggccctgcagaagaaccgcagtgctgatttcaaccctgactttgttttcactgagaag
gaagggatgtatgatggcagctgggccctggctgacgtcatgagccagctcaagaagaag
agagcagccactacattagatgagaagattgagaaggtgcggaagaaaaggaaagcagag
gagaaagaagtcaagtctgggaagtcagaggagaaagaagctggggtgggcggtggccta
gaggagcaggaggacggggaagggggaaaggatgaagactctgccgaagaagagtcagag
actgactactcctcagctgacgagaaagtcctcaccaaagcagatacactcaaagtaaag
gagcggaagaggaagaagaagggacaggaagcaggaggattctttgaagatgcctctcag
tacgacgaaagcctctccttccaggacatgaacctgtcccggccccttctgaaggccatt
acagccatgggcttcaagcagcccaccccgatccagaaagcctgcattcccgtaggtctg
ctagggaaagacatctgcgcatgtgcagccaccgggacaggtaaaaccgcagccttcgcc
ctccctgtcttggagcgtctcatctacaaaccccgccaggcccccgtcacccgtgtgctg
gtgctggttcccacccgcgagctgggcatccaggtccactcagtcaccaggcagctggct
cagttctgcagcatcaccacctgcctggctgtgggaggcctggatgtgaagtctcaggaa
gcggcgctgcgggcagcccccgatgtgctcatcgccaccccaggccgactcatcgatcac
ctccacaactgtccctccttccacctcagcagcatcgaggtgctcatcctggatgaggcc
gacaggatgctggatgagtacttcgaggagcagatgaaggagattatccgtatgtgctca
catcaccgccagaccatgcttttctcggccaccatgacagatgaggtgaaagatctggca
tcggtctccttgaagaatcccgttcggatatttgtgaacagcaacacagatgtggctccc
ttcctgcggcaggaattcatacggatccggcctaaccgagaaggggatcgggaagccatt
gtggcagctctgctgacgagaaccttccctgaccacgtgatgctgttcacccagaccaag
aagcaggcgcaccgcatgcatatcctgcttgggctcctaggcctgcaggtgggcgagctc
cacggcaacttgtctcagacgcagcggctggaggcactccggcgctttaaagatgaacaa
attgacatccttgtggccacagatgtggcagcccgtggacttgacatcgagggggtcaag
acggtcatcaacttcaccatgcccaacaccgtgaagcactacgtgcatcgagtggggcgg
acagcccgcgctggcagggctgggcgttctgtgtctctggtgggggaagaagagcggaaa
atgctgaaggagatcgtgaagactgccaaggcccctgtgaaggcccggatccttccccaa
gatgtgatcctcaagttccgggacaagattgagaagatggagaaagatgtgtatgcggtg
ctgcaactggaggcggaggagaaggagctgcagcagtcagaggcccagatcagtactgca
aagcggctcttggagaaggggcaggaggcaaaagagcagcagccagagaggagctggttc
cagaccaaagaagagaggaagaaggaaaaaattgccaaggccctgcaggagtttgacctg
gctctaagaggcaagaagaaaaggaagaagttcatgaaggatgtgaagaaaaagggggag
atgacagcagaggaaaggtcccagtttgaaatcctcaagtcacagatgtttgctgagcgc
ttggccaagaggaaccgcagagccaagcgggccagggtgatgcccgaggaagagccggcc
aaaggcccggctaagaagcagaggaagatctcagtgtttgatgaagagctcaccaacacc
agcaagaaggccctgaaacagtatcgagctggcccttcctttgaagaaaggaaacagttg
ggtctgccccaccagaggagaggaggaaacttcaaatctaagtccaggtataagaggaag
aagtag
DBGET
integrated database retrieval system
