Dipodomys spectabilis (banner-tailed kangaroo rat): 122128055
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Entry
122128055 CDS
T07891
Symbol
Ddx56
Name
(RefSeq) probable ATP-dependent RNA helicase DDX56
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dsp03009
]
122128055 (Ddx56)
Enzymes [BR:
dsp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122128055 (Ddx56)
Ribosome biogenesis [BR:
dsp03009
]
Eukaryotic type
Pre-60S particles
Helicases
122128055 (Ddx56)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Motif
Other DBs
NCBI-GeneID:
122128055
NCBI-ProteinID:
XP_042558312
LinkDB
All DBs
Position
Unknown
AA seq
546 aa
AA seq
DB search
MADPEALGFEHMGLDPRLLQAVTDLGWSRPTLIQEKAIPLALEGKDLLARARTGSGKTAA
YAIPMLQQLLHRKATGPVVEQAVRGLVLVPTKELARQAQSMIQQLAAYCARDVRVANVSA
AEDSASQRAVLMEKPDVVVGTPSRILSHLQQNTLKLRDSLELLVVDEADLLFSFGFEEEL
KSILCHLPRIYQAFLMSATFNEDVQALKELVLHNPVTLKLQESQLPGADQLQQFQVVCET
EEDKFLLLYALLKLSLIRGKSLLFVNTLERGYRLRLFLEQFSIPSCVLNGELPLRSRCHI
ISQFNQGFYDCVIATDAEVLGAPAKDKRQGRRSKGDKASDPEAGVARGIDFHHVSAVLNF
DLPPTPEAYIHRAGRTARANNPGIVLTFVLPTEQSHLGKIEELLSGEGEARVLLPYQFRM
EEIEGFRYRCRDAMRSVTKQAIREARLKEIKEELLHSEKLKTYFEDNPRDLQLLRHDLPL
HPAVVKPHLSNVPEYLVPAPLRGLIQLRKRRKKLFSSRKAKKAKTQNPLRSFKHKEKKPR
PTTVPS
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggcggacccagaagccctcggctttgagcacatgggcctggaccctcggcttctgcag
gctgtcacggatctgggctggtcgcggcctacgctgatccaggaaaaggccatacctttg
gctctggaagggaaggaccttctggcccgagcccgcacgggctccgggaagacagctgct
tacgcgatcccgatgctacagcagctgttgcacaggaaggcgacaggtcctgttgtagaa
caggctgtgagaggccttgttcttgttcctaccaaggagctggcacggcaagcccagtcc
atgattcaacagctggctgcctactgtgctcgggatgtgcgggtggccaatgtctcagct
gcggaagactcagcttctcagagagctgtgctaatggagaagccagatgttgtggtggga
actccatcccgcatattaagccatttgcagcagaacaccttgaaactgagagactccttg
gagctgctggtagtggatgaggctgatcttctcttttcctttggctttgaggaagagctc
aagagtattctctgtcacttaccccggatttatcaggctttcctcatgtcagctactttt
aatgaggatgtacaagcactgaaggagctggttctacacaacccggttacccttaagtta
caggaatcccagcttccaggggcagaccagttacagcaatttcaggtggtctgtgagact
gaagaagataaattcctgctgctctatgccctccttaagctgtcattgattcggggaaag
tccctgctgtttgtcaacactttagagcggggttatcggcttcgcctattcttggaacag
ttcagcatcccctcctgtgtgctcaatggagaactcccgctgcgctccagatgccacatc
atctcacagttcaaccaaggcttctatgattgtgtcatagcaacagatgctgaagtcctg
ggggccccagccaaggacaagcggcagggccgacggtccaaaggagacaaggcttctgat
ccagaggctggtgtggcacggggtatagatttccaccatgtgtctgctgtgctcaacttt
gatcttcctcctacccctgaggcttatatccatcgagctggcagaacagcacgagccaac
aacccaggcatagtattgacctttgtgctacccacagagcagtcccacttgggcaagatt
gaggagctgcttagtggagagggtgaggcccgggtattgcttccttaccagttccggatg
gaggagattgagggcttccgctatcgctgcagggatgccatgcgctccgtgaccaaacag
gccatccgggaggcaagattgaaggagattaaagaggagcttctgcactctgagaagctc
aagacatacttcgaagacaaccccagggacctccagctgctgcggcatgacctgcccttg
caccctgcagtggtgaagcctcacctgagcaatgtcccggagtacttggtccctgcccct
ctacgtggtctcatacaacttcgcaagaggcggaagaagctgttctccagtaggaaagct
aagaaggcgaagacccaaaatccactgcgcagctttaagcacaaagaaaagaaacctaga
cccacaacagtgccctcctga
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