Dipodomys spectabilis (banner-tailed kangaroo rat): 122128146
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Entry
122128146 CDS
T07891
Name
(RefSeq) E3 ubiquitin-protein ligase RNF12-A-like
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dsp04121
]
122128146
Enzymes [BR:
dsp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122128146
Ubiquitin system [BR:
dsp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122128146
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
zf-C3HC4_3
Prok-RING_4
zf-HC5HC2H_2
zf_RING_Vps8
Myb_DNA-bind_4
zf-RING_16
zf-RING_4
zf-Nse
zf_RING_Vps8_fungal
zf-HC5HC2H
Motif
Other DBs
NCBI-GeneID:
122128146
NCBI-ProteinID:
XP_042558373
LinkDB
All DBs
Position
Unknown
AA seq
755 aa
AA seq
DB search
MEDSDSSDNENDTLVKHRRQRERLAREEAFYRFVNRLSNEDYKLMRDNNLLGAIGEKTEE
ELQRSLQRIKESIQIPGFYPNYFMPTIQPRTFNSPGGRPPIHDVQHSVGSVTNQVSSFFR
QPEPMTGREQRVNRSCTATSENNLNTSDTELRMNSYLRTQRQAANTQSDSIFSRPSRAEA
SVSEASTEVQPPASQEIESNISTIIRKVRARPQSSSSSYSQNEILWRVHNPENIQKQTHT
ETDVTFPGSQLNTTISSMNTLGTSGQRRERNRSPELQRVRARNEESSPSNSQSQIQRKVH
NTGKTYRRTANSQSETTSVRPSTSEVTAAETSMDILPSRIQRRTRSTSPVHRRVKPRIEG
SLPPNNASSENSRVNEAEMSSSIPQHEALTGQTTGCSLCIKQLLAGLTATNDRTAQTDSN
RSIRGESCIMRPSNQTPDSNSEVSFNTVREHSLGDNIANRSQVTPQTTSNTSTLGSGQVS
RTLLSNTEQSRETACIRTTVSTQSKVHLNNATLVITHRTLCQIMVEFDPLTNHTNNDSDT
ENDTDGNNDNDTDRENEDSHRDESEVYCYSDFEHSDSFVIDSTESENTESERDYESDESE
IYASNLNPDWDSYNSPGNSESSLIASYNSSDESSSTESSLSNSSLETREESRPITPTSDD
FNFSPIEDHLEENEDSPPMGGLSKRQIDMLTVRNFNESDASNSCTICIEEFREGNKIRTL
PCSHTYHVHCIDSWLADNATCPVCRRRVRSDGREL
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atggaagattcagattctagcgacaatgaaaatgatacgttggtcaaacatagacgccaa
agggagagactggcaagagaagaagctttctaccgctttgtgaacagactgagtaacgaa
gactacaaacttatgagagataacaacttgcttggcgccatcggtgaaaaaaccgaagaa
gaattgcagagaagtctacagcgcattaaagaatcaatacaaattccaggattctatccg
aactatttcatgccaaccattcaacctaggacctttaactcaccaggtggaagacctcct
atccatgatgtacaacatagtgttggttcggtaacaaaccaggttagttccttctttagg
caacctgaaccgatgacaggaagagaacaaagagtaaatcgatcttgtacagcaacaagt
gaaaataatttaaacactagtgatactgagctaagaatgaattcttacttaaggacccag
aggcaagcagcgaatacacaatctgactcaatattttcaaggccctctagagcagaagca
agtgtgagcgaagcatcaactgaagttcaacctcctgcaagtcaggaaatagaaagtaac
ataagcacaataatccggaaagtcagagcaaggcctcagagtagttcatcttcatattca
cagaatgaaattctatggagagttcataatccagaaaacattcagaaacaaacacataca
gaaactgatgtaacatttccaggatcacaactaaatacaactatatcctcaatgaatact
ctaggtactagtggtcagagaagagaaagaaataggagccctgaacttcagagagttaga
gccagaaatgaggagagctcaccctcgaattcacaaagtcaaatacaaagaaaagttcat
aatacaggaaagacttataggcgaacagctaattcacaatctgagacaacatccgtaagg
ccatctacatcagaagtcactgcggcggaaacatcaatggacattctacctagcagaatc
caaagaagaacaagaagcacgagtccagtacatcggagagttaaaccaagaattgaaggt
agcttgcctcctaataatgcatcctctgagaattctagggttaatgaggctgagatgtct
tctagcattccacaacatgaggcactgacagggcaaacgactggttgtagtttgtgtatt
aaacaacttcttgcaggtttgacagcaacaaatgaccgtacagcacaaactgattcaaac
agaagcattcgtggtgagtcctgtataatgagaccaagtaatcaaaccccagattcaaat
tctgaagtaagttttaacacagtaagagaacattcactaggagacaacatagctaacaga
agtcaagtaacacctcagacaacaagcaacactagtactttaggaagtggtcaagtaagc
agaactttgctttcaaatactgagcagtcacgtgagactgcttgtatccgaacaactgtg
tctacacagtcaaaggttcatttaaataatgccacattagtgattactcacagaacatta
tgccagataatggtagaatttgatccactaactaaccatacaaacaatgacagtgacaca
gagaatgacactgatggtaacaatgataatgacactgatcgtgagaatgaagacagtcat
agagacgagagtgaggtttattgttacagtgattttgaacatagtgactcattcgtaatt
gatagcacagaaagcgaaaatacagaaagtgaaagagattatgagtctgatgagagtgaa
atttatgcttctaatctaaatcctgactgggattcgtataattccccaggaaattctgaa
tctagtcttattgccagttataactccagcgatgaaagtagtagtactgaaagttcactg
tcaaactcatcactagagaccagggaagaaagtagacctattaccccaacatctgatgac
ttcaacttctcacctattgaagatcacttagaggaaaatgaagacagccctcctatggga
ggactctctaaacgacaaattgatatgttaaccgtaagaaattttaatgaaagcgatgca
tcaaattcatgtactatctgtatcgaggaattcagagagggcaataagattcgcacactg
ccttgctctcatacataccacgtacactgtatagattcatggctggctgataatgctaca
tgtcctgtctgtcgaaggcgagtacgttctgatggcagagaattataa
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