Dichomitus squalens: DICSQDRAFT_101734
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Entry
DICSQDRAFT_101734 CDS
T03133
Name
(RefSeq) hypothetical protein
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
dsq
Dichomitus squalens
Brite
KEGG Orthology (KO) [BR:
dsq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dsq03016
]
DICSQDRAFT_101734
Enzymes [BR:
dsq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
DICSQDRAFT_101734
Transfer RNA biogenesis [BR:
dsq03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
DICSQDRAFT_101734
Prokaryotic type
DICSQDRAFT_101734
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_4
Motif
Other DBs
NCBI-GeneID:
18833323
NCBI-ProteinID:
XP_007363464
JGI:
101734
LinkDB
All DBs
Position
Unknown
AA seq
880 aa
AA seq
DB search
MATWNVSVLTSASSDTEPSLLVNFGTAKYIFNASEGLGRSWLQSHHSFRRLKGLFLTGAG
TQRCGGIAGLLMLCADASVPAMDIVGPYGLMHYLATMRGYTYRSMMTVKAVEAPTTPAHE
SLNSPPPIFQDENITVHSIPLYPSVETVPAGDPSERPLKRKRSLSPPTSSKRTSPPPVGD
SVVESTSPVPAVIYERAKRSDFSPSSLTGSDAQEWRKLMLQEMFPLEAPPEQDIGLSKKE
KREARQTIVQTASAPMSSRARSPVANDKKHARLPRLEMGPEGLPTLGYLLVGPTVRGKFD
AKKAEELGIPRGPIRGRLIKGETITFEVDDGQGGKLQRTVRPEDCVGPSESPQSILILDV
PTSAYIPSLMASFADSPFFSQYRSKEETARRQHPVYAVYHMCSAKVLEDERYKSFMNGFS
DETYHVVSSKEHTPNQISFTRSALVQAKLNQLDADMFPIPKYELAPQRDLASITGLPTRT
ILSRRDLLLGLRPLNAPGYDSLAKEDAFKTLAESKSLPELSASVNEKFAAVKARVAERIG
RRSPASQPGDDVVVTPLGTGSAIPTLLRNVSGTLIQIPGHGSILLDCGEGTWGQLVRSFG
DDPARSTGVWEVLRNIKCIYLSHMHGDHHMGLSKILTMRAQMNPPPTDPLYVVGLRHHLM
YLLERQELEDQGLADLNGIVMVLSDALNWRFARPYGRNQTEDEPFMNQERSRENAQAMCH
ALGLKSFTTVDVAHRTRCYGVVIRHRDGWSMAFSGDTMPTDNLVKAGRDVTLLIHESSMS
PEEEELAREKAHSTSAQAIDVGRRMRAQKILLTHFSARYPGMPPRQGETSGGPLIGLAFD
YSRIRLGDMWKLNTYLPAIQHAFDDLGEEEPMEIDLTKLQ
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atggcgacctggaatgtctctgttctgacctccgcgtcgtctgacacggagccctctctc
ctcgtcaactttggaacggccaagtacatcttcaatgccagcgagggcttgggtcggtca
tggttgcagagccaccattcctttagaaggttgaaggggttattcttgacgggtgcaggg
acacagaggtgtggtggcattgctggcctcttgatgctttgtgcggacgcgtcagtgccc
gctatggacatcgtgggaccgtatggcttgatgcattatctcgctaccatgcgcgggtat
acatatcgctcaatgatgactgtcaaggcggtggaagctccaaccactcccgcgcacgaa
agcctcaactcgccgccgccaatttttcaggacgaaaacatcacggtccactccatccct
ttatacccgtctgttgagaccgtacctgctggggacccttcagaacggccattgaagaga
aaacgttccctctctcccccaacttcctcaaaacgcacttctccgccgccagttggtgac
agcgtcgtcgagtctacgtctccagtgcccgcagtcatctacgagcgtgcgaagaggagc
gatttctctccgtcctcgctcactggttcagacgctcaagaatggcgaaagctcatgctg
caggagatgtttccgctggaggctcccccagagcaggatatcggcctctctaagaaggag
aagcgcgaggcgagacagactatcgttcagacggcgagcgctccgatgtcatctcgagca
cgatcgccagttgcaaatgacaagaagcacgcccggctcccccgtctggagatgggaccc
gaagggctgccgacgctcgggtacctcctggttgggccgactgttcgtggcaagttcgat
gcgaagaaggcggaggagcttggcattcctcgtggtcccatccgagggcgactgatcaag
ggcgagacgatcacattcgaggtagacgacggtcaaggtggcaagctgcagcgtaccgtc
agaccggaggattgtgttggcccaagcgagagccctcagtcgattctcatactggacgtg
ccaacgtcggcatacataccctccctcatggcatcctttgcggactcacctttcttctcg
caatatcgctcaaaggaagagacggcccggaggcagcatcccgtgtacgccgtgtatcat
atgtgtagcgccaaagtactcgaagatgaacggtataagtcgttcatgaacgggttctct
gatgagacttaccacgtagtatcttcaaaagagcacacgccaaatcaaatctccttcact
cgttcggcactcgtgcaagcgaagctcaatcaactggacgctgatatgttccccatccca
aaatatgaactagctcctcagcgagatcttgcttccatcaccggtcttcccacaaggaca
atcttgtctcgaagagatcttctactcggcctccgacccctcaatgcacctgggtacgat
tccttagcaaaggaggatgcgttcaagacgcttgctgagtccaaatctttgcccgaacta
tcggcttcagtcaacgagaagttcgccgccgtgaaggcgcgcgttgctgagcggataggc
cgacgtagcccggcgagccaaccaggagacgacgtcgtggtaactcctctcggcactggc
agtgctatacccaccttattgcgaaatgtgtccggaacgttgattcagatcccgggccac
ggcagcatccttctcgattgtggcgagggtacctggggccaacttgttcgatctttcggc
gacgatcccgcgaggtccacaggtgtttgggaggtattgcgtaatataaagtgcatctac
ctgagtcatatgcacggcgaccatcacatgggactgtcgaagattttgacaatgcgtgcg
cagatgaacccacctcccacggacccactgtatgtcgtcggccttcgtcaccacctcatg
tacctcttggaacgtcaagagcttgaagatcaagggctggcagatctcaatgggattgtc
atggtcctctcagacgcgcttaattggcgattcgctcgcccgtacggaaggaaccagact
gaagacgagcccttcatgaaccaagaaaggtcgcgcgagaatgctcaagcgatgtgccat
gcgctcgggttgaaaagcttcaccaccgttgatgtcgcgcaccgaacccgctgctacggt
gtggtgatcaggcacagggacggatggagcatggccttttccggggacaccatgccgacg
gacaatttggtcaaggcaggccgcgacgtcacgttgcttatccacgagtcgagcatgagc
cccgaagaagaggagctggcgcgagagaaggcccacagcacctcggcacaagcgatcgat
gtgggcaggcgtatgcgggctcagaaaattctcctgacccacttctctgcccgttatcct
gggatgccgcctcgacaaggcgaaacgtctggcgggcccctcattgggcttgcattcgac
tattctcggatacgcttgggcgacatgtggaagctcaacacgtacctgcctgcgatacaa
cacgcatttgacgacttaggggaggaggagcccatggaaatcgacctcacaaaattacag
tag
DBGET
integrated database retrieval system
