KEGG   Dichomitus squalens: DICSQDRAFT_101887
Entry
DICSQDRAFT_101887 CDS       T03133                                 
Name
(RefSeq) DNA mismatch repair protein
  KO
K08735  DNA mismatch repair protein MSH2
Organism
dsq  Dichomitus squalens
Pathway
dsq03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:dsq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    DICSQDRAFT_101887
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dsq03400]
    DICSQDRAFT_101887
DNA repair and recombination proteins [BR:dsq03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     DICSQDRAFT_101887
SSDB
Motif
Pfam: MutS_V MutS_III MutS_II MutS_IV MutS_I AAA_27
Other DBs
NCBI-GeneID: 18833338
NCBI-ProteinID: XP_007363543
JGI: 101887
LinkDB
Position
Unknown
AA seq 964 aa
MSLMYGKEKDAEYEIDNSSHPGFCSFFAKLPPKSPETGTVRLFFRNEYYSVHGPDAHYVA
THLFRTNSVIKYLGGRAGLPSVTLSESLAKSFLRDALTSKQLKVEIWAPEAGQGKKATKF
VLDKEASPGNLSAVEDLLFVNTDIVSAPIVMAIKIASTPAVPGSTAVKTKAVGVAYADSS
TRELGVADFVDNDLFSNTETLIIQLSVKEAIIPTGTNSGTTERDFDLKKLKEVLDRCGVV
ITERKPSDFTVKNINDDLVRLLNASAMPSSSTDSAATIPQLSLPTAPAALSALVSYLSLL
SDPSNHGAWSIRTHDLSQYMRLDASALRALNLTEAPGNIGSNKNTTLFGLLNKCKTAQGS
RLLGSWLKQPLVNRHDILRRQSLVEAFFEDANTRRILQDDYLKLMPDMHRICKRFQKSIA
SLEDVVRVYQAVLKLEGFISTIESMETSSEDQKALLKEIYLTKLKEFDGSLSKYSEMVQQ
TLDLDELENHNFVIKPDYDARLQSLADKLAEVRDGLDAEHRKVGKALGLELDKKLHLENS
PTYGYCFRISKNDVKLLHDDKKRYIELGALKSGVFFTTPTLKGLSTEHTEITEQYSRTQS
GLVKEVVNIASTYTPVLEALNNVIAHLDVTVSLAHVAVNAPETYVKPEILARGSGSLVLK
EARHPCLEVQDDLSFIPNDVEMIKDESEFQIITGPNMGGKSTYIRQVGVIALMAQTGSFV
PCASARIPIFDSILCRVGAGDSQLKGISTFMAEMLETATILRSATKDSLIIIDELGRGTS
TYDGFGLAWAISEHIASQIHAFCMFATHFHELTALDQEISHVKNLHVVAHVSDSEEGGGD
RDITLLYKVEPGVCDQSFGIHVAELANFPESVVKLARKKAEELEDFNHEKAEPELPADVV
EEGTKIVEEMLRAWTSTGHDGEDVVMADDDASPEEQLEELKRCVERFRPKIESNPWAQSL
LASL
NT seq 2895 nt   +upstreamnt  +downstreamnt
atgtctctcatgtatggcaaagagaaggatgcagagtacgagatagataactcgtctcat
cctggcttctgctcattctttgccaaactccctcccaagtctcctgagacagggacagtt
cgtctcttctttcgcaacgagtactactctgtgcatgggcccgacgcccattacgtcgca
acacatcttttccgtacgaactccgtcatcaagtacctcggtgggcgcgctggtctaccc
agcgtcacgctcagcgagagtcttgccaagagtttcctccgggatgcgttgacgagtaag
cagctgaaagtggaaatatgggctccagaagcaggacaaggaaagaaggctaccaagttc
gttttggacaaggaggcttctcctggaaacctgtcagctgtagaggatcttttatttgtg
aacacggacatcgtctccgctccaatcgtcatggccatcaaaattgcgagtacgccagcg
gtaccgggaagcaccgcagtcaagaccaaagccgtcggcgtcgcgtacgccgacagcagc
acgcgggagctgggtgtggcagatttcgtcgacaatgaccttttctcaaacactgagact
cttatcatccaactgtccgtcaaagaggccatcatccccaccgggacgaactctggcact
actgagcgcgacttcgacttgaagaagctaaaggaagtgctcgacaggtgtggggttgtc
ataaccgaacggaaacctagtgacttcactgtaaaaaacatcaacgatgacctcgtacgc
ttgctcaacgcgagcgcgatgccttcgtcatctacagactctgcagccaccattccgcag
ctgtcactgccgacggcccctgcagctctgtcggcacttgtttcctatctttccctactc
tctgacccgtccaaccatggcgcttggagcattcggacgcatgatttatctcagtatatg
cgccttgatgctagcgcgcttcgcgccttgaacttgactgaggcgccagggaacatcgga
tccaacaaaaatacgacattgttcggccttctgaacaagtgcaagactgcccaagggtca
aggttgctcgggagctggctgaagcagccgctggtgaaccggcacgacatcctcaggcga
cagagcttggtggaggcgttcttcgaggatgcaaacactcgtcgaatactgcaagatgac
tacctgaagctcatgccggacatgcaccgtatctgcaagcgattccagaagtcgatcgct
tcgctggaagacgtcgttcgcgtctaccaggccgtactcaagctcgaagggttcatcagc
accatcgagagcatggagacaagctcggaggatcagaaggccctcttgaaggagatatat
ctcacgaaactcaaggaattcgacggctcgctgtcgaagtactccgagatggtgcagcag
acgctcgaccttgacgagctcgagaaccacaacttcgtcatcaagccggactacgacgcg
cgcctgcagtctctcgcagacaagctagctgaagtgcgcgatgggctcgatgcggagcac
cgtaaggtcgggaaggcgctcgggcttgagctcgacaagaagctccacctcgagaactcg
cctacgtatggatactgcttccggatctccaaaaatgatgtgaagttgctgcacgacgat
aagaagaggtacatcgagttgggcgctttgaagagcggggtgttcttcactaccccgacc
ctcaagggcctttcgacggagcataccgaaattaccgagcagtattcgcgcacgcaaagt
gggctcgtcaaggaggtcgtgaatatcgcttcaacgtacacgcccgtactcgaggcgctg
aacaacgtcattgcacacttggacgtaactgtcagtctcgcccatgttgccgtcaacgct
ccggagacgtacgtcaagcccgagatccttgcgcgtggctctggcagtctggtcttgaag
gaggctcgacacccatgcctcgaggtgcaagacgacctcagcttcattccgaatgatgtc
gagatgatcaaagacgagagcgagttccaaatcatcactggaccaaacatgggcggaaag
agcacatatatccgccaggtcggtgtaattgctctgatggcacagaccgggagctttgtg
ccctgtgcgtcagcgcgtatcccgattttcgactccattctctgccgcgtcggtgctggt
gacagccagttgaagggcatttcgactttcatggccgagatgctcgaaacggcaaccatt
ctccggtctgcgacgaaggactcgttgattatcattgatgagttaggacgaggtacttcg
acctacgacggctttggattggcatgggccatttccgagcacatcgcgtctcagatccat
gctttctgcatgttcgcgacccacttccacgagctgaccgccctggatcaggagattagt
catgtcaagaacctccatgtcgtcgcccatgtctcggactccgaggaaggcggcggggat
cgcgacattactttgctctacaaggtcgagccaggcgtttgcgatcagagttttggtatt
cacgtcgctgaattggcgaacttccccgaaagcgtggtcaagctagcgaggaagaaagcc
gaggagctcgaggacttcaaccacgagaaggcagagcccgaactgcccgcagatgtggtt
gaagaaggtacgaagattgtcgaagagatgctgcgcgcatggacgtccaccggccacgac
ggcgaggacgtcgtcatggctgatgacgatgcttctcccgaagagcagcttgaagagctc
aagaggtgtgtagagagattccgcccgaagattgagagcaatccatgggcgcagagcctg
ctcgcgtcgctatga

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