Dichomitus squalens: DICSQDRAFT_101887
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Entry
DICSQDRAFT_101887 CDS
T03133
Name
(RefSeq) DNA mismatch repair protein
KO
K08735
DNA mismatch repair protein MSH2
Organism
dsq
Dichomitus squalens
Pathway
dsq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dsq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
DICSQDRAFT_101887
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dsq03400
]
DICSQDRAFT_101887
DNA repair and recombination proteins [BR:
dsq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
DICSQDRAFT_101887
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
MutS_I
AAA_27
Motif
Other DBs
NCBI-GeneID:
18833338
NCBI-ProteinID:
XP_007363543
JGI:
101887
LinkDB
All DBs
Position
Unknown
AA seq
964 aa
AA seq
DB search
MSLMYGKEKDAEYEIDNSSHPGFCSFFAKLPPKSPETGTVRLFFRNEYYSVHGPDAHYVA
THLFRTNSVIKYLGGRAGLPSVTLSESLAKSFLRDALTSKQLKVEIWAPEAGQGKKATKF
VLDKEASPGNLSAVEDLLFVNTDIVSAPIVMAIKIASTPAVPGSTAVKTKAVGVAYADSS
TRELGVADFVDNDLFSNTETLIIQLSVKEAIIPTGTNSGTTERDFDLKKLKEVLDRCGVV
ITERKPSDFTVKNINDDLVRLLNASAMPSSSTDSAATIPQLSLPTAPAALSALVSYLSLL
SDPSNHGAWSIRTHDLSQYMRLDASALRALNLTEAPGNIGSNKNTTLFGLLNKCKTAQGS
RLLGSWLKQPLVNRHDILRRQSLVEAFFEDANTRRILQDDYLKLMPDMHRICKRFQKSIA
SLEDVVRVYQAVLKLEGFISTIESMETSSEDQKALLKEIYLTKLKEFDGSLSKYSEMVQQ
TLDLDELENHNFVIKPDYDARLQSLADKLAEVRDGLDAEHRKVGKALGLELDKKLHLENS
PTYGYCFRISKNDVKLLHDDKKRYIELGALKSGVFFTTPTLKGLSTEHTEITEQYSRTQS
GLVKEVVNIASTYTPVLEALNNVIAHLDVTVSLAHVAVNAPETYVKPEILARGSGSLVLK
EARHPCLEVQDDLSFIPNDVEMIKDESEFQIITGPNMGGKSTYIRQVGVIALMAQTGSFV
PCASARIPIFDSILCRVGAGDSQLKGISTFMAEMLETATILRSATKDSLIIIDELGRGTS
TYDGFGLAWAISEHIASQIHAFCMFATHFHELTALDQEISHVKNLHVVAHVSDSEEGGGD
RDITLLYKVEPGVCDQSFGIHVAELANFPESVVKLARKKAEELEDFNHEKAEPELPADVV
EEGTKIVEEMLRAWTSTGHDGEDVVMADDDASPEEQLEELKRCVERFRPKIESNPWAQSL
LASL
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgtctctcatgtatggcaaagagaaggatgcagagtacgagatagataactcgtctcat
cctggcttctgctcattctttgccaaactccctcccaagtctcctgagacagggacagtt
cgtctcttctttcgcaacgagtactactctgtgcatgggcccgacgcccattacgtcgca
acacatcttttccgtacgaactccgtcatcaagtacctcggtgggcgcgctggtctaccc
agcgtcacgctcagcgagagtcttgccaagagtttcctccgggatgcgttgacgagtaag
cagctgaaagtggaaatatgggctccagaagcaggacaaggaaagaaggctaccaagttc
gttttggacaaggaggcttctcctggaaacctgtcagctgtagaggatcttttatttgtg
aacacggacatcgtctccgctccaatcgtcatggccatcaaaattgcgagtacgccagcg
gtaccgggaagcaccgcagtcaagaccaaagccgtcggcgtcgcgtacgccgacagcagc
acgcgggagctgggtgtggcagatttcgtcgacaatgaccttttctcaaacactgagact
cttatcatccaactgtccgtcaaagaggccatcatccccaccgggacgaactctggcact
actgagcgcgacttcgacttgaagaagctaaaggaagtgctcgacaggtgtggggttgtc
ataaccgaacggaaacctagtgacttcactgtaaaaaacatcaacgatgacctcgtacgc
ttgctcaacgcgagcgcgatgccttcgtcatctacagactctgcagccaccattccgcag
ctgtcactgccgacggcccctgcagctctgtcggcacttgtttcctatctttccctactc
tctgacccgtccaaccatggcgcttggagcattcggacgcatgatttatctcagtatatg
cgccttgatgctagcgcgcttcgcgccttgaacttgactgaggcgccagggaacatcgga
tccaacaaaaatacgacattgttcggccttctgaacaagtgcaagactgcccaagggtca
aggttgctcgggagctggctgaagcagccgctggtgaaccggcacgacatcctcaggcga
cagagcttggtggaggcgttcttcgaggatgcaaacactcgtcgaatactgcaagatgac
tacctgaagctcatgccggacatgcaccgtatctgcaagcgattccagaagtcgatcgct
tcgctggaagacgtcgttcgcgtctaccaggccgtactcaagctcgaagggttcatcagc
accatcgagagcatggagacaagctcggaggatcagaaggccctcttgaaggagatatat
ctcacgaaactcaaggaattcgacggctcgctgtcgaagtactccgagatggtgcagcag
acgctcgaccttgacgagctcgagaaccacaacttcgtcatcaagccggactacgacgcg
cgcctgcagtctctcgcagacaagctagctgaagtgcgcgatgggctcgatgcggagcac
cgtaaggtcgggaaggcgctcgggcttgagctcgacaagaagctccacctcgagaactcg
cctacgtatggatactgcttccggatctccaaaaatgatgtgaagttgctgcacgacgat
aagaagaggtacatcgagttgggcgctttgaagagcggggtgttcttcactaccccgacc
ctcaagggcctttcgacggagcataccgaaattaccgagcagtattcgcgcacgcaaagt
gggctcgtcaaggaggtcgtgaatatcgcttcaacgtacacgcccgtactcgaggcgctg
aacaacgtcattgcacacttggacgtaactgtcagtctcgcccatgttgccgtcaacgct
ccggagacgtacgtcaagcccgagatccttgcgcgtggctctggcagtctggtcttgaag
gaggctcgacacccatgcctcgaggtgcaagacgacctcagcttcattccgaatgatgtc
gagatgatcaaagacgagagcgagttccaaatcatcactggaccaaacatgggcggaaag
agcacatatatccgccaggtcggtgtaattgctctgatggcacagaccgggagctttgtg
ccctgtgcgtcagcgcgtatcccgattttcgactccattctctgccgcgtcggtgctggt
gacagccagttgaagggcatttcgactttcatggccgagatgctcgaaacggcaaccatt
ctccggtctgcgacgaaggactcgttgattatcattgatgagttaggacgaggtacttcg
acctacgacggctttggattggcatgggccatttccgagcacatcgcgtctcagatccat
gctttctgcatgttcgcgacccacttccacgagctgaccgccctggatcaggagattagt
catgtcaagaacctccatgtcgtcgcccatgtctcggactccgaggaaggcggcggggat
cgcgacattactttgctctacaaggtcgagccaggcgtttgcgatcagagttttggtatt
cacgtcgctgaattggcgaacttccccgaaagcgtggtcaagctagcgaggaagaaagcc
gaggagctcgaggacttcaaccacgagaaggcagagcccgaactgcccgcagatgtggtt
gaagaaggtacgaagattgtcgaagagatgctgcgcgcatggacgtccaccggccacgac
ggcgaggacgtcgtcatggctgatgacgatgcttctcccgaagagcagcttgaagagctc
aagaggtgtgtagagagattccgcccgaagattgagagcaatccatgggcgcagagcctg
ctcgcgtcgctatga
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